Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1668 ATGGAGGTTTGGAATGAGAAAATGGTGGCGGAAACTGAAAATGCTGGTGGTGCATTGAGTGATAAGAGCTCAACGGCGAAGGTGAAAGAGACTATTAGGACTTTTAACAAACACTATCTTCATTTGGTTCAGGTGGAAGAAGAGAGGGTTGCTAAAGAGATAGCTGAATTTGAGAAGACAAACGGCGGGAAGAAATCTGCTGCTAAAAAGAAATCTCGAGGGAAGAAGTCCCCTAAGAAAGATGCAAAAACTAAAGAAGAAAAGCACCCTTCCAAGCGACCTTCCAAGCGACCTGATCTGAAAGTCATAACCAAGATGATGCAAAATAATGAGATACTCTACCCTGGCAAAAGAATTGGCAGCATTCCAGGCATTGAGGTTGGATATCAGTTCTATTCTCGTGCTGAAATGGTTGCAGTTGGTTTTCATAGCCATTGGTTAAATGGCATTGATTTTATCGGCAAATCTTATTCTAAAATGTACAAGCTCAATCTCCCAGTTGCTGTGGCCATTGTTATTTCAGGCATGTATGAGGATGATCTGGATAATGCTGAGGATGTTGTGTACACTGGTCAAGGTGGGCATAATCTGACTGGTAATAAGCGTCAAATTCAAGATCAAAAGTTGGAGCGGGGTAATTTAGCACTCAAGAACTGCTGCAAGCAAGAAGTGCCAGTAAGGGTGATTCGAGGTCATAATTCAAGTAGCAGTTACACTCGTAAAGTCTACACATATGATGGCTTGTACAAGGTTGACAAATATTGGGCAGATAAGGGATTGTCTGGCTTCACAGTATACAAGTTTCGTCTCAGGCGGGTCGAAGGACAGCCTACATTAACAACAAATCAGGTCTATTTCACAATGGGACGTGTACCTCAGTCTACAGCAGAAATACGAGGGTTGATCTGTGAGGATATCACTAACGGTCAGGAAACTGTGCCCATTCCAGCTACAAATTTGGTTGATGACCCACCTGTTCCACCTCCCCCAGGTTTCAAATATTTGAAGTCTCTGAAGGTTGCAAAAAGTGTTAGGCTTCCTGTGAGTGCCTCTGGATGCAAATGCAATGGCAAATGTATTGATCCAAACACCTGTGAATGTGCGAAGAGCAATGGCTCTGAATTTCCCTATGTATCTAAAGATGGTGGCAGACTAATTGAAGCTAAAGACGTTGTGTTTGAATGTGGTCCCAATTGTGGCTGTGGTCCTGAGTGCGTGAATAGGACTTCTCAAAGAGGACTTCAATATCGTCTAGAGGTTTTCCGTACTGCAAAGAAAGGATGGGCTGTTAGATCCTGGGATTTTATACCTTCTGGTGCACCAGTTTGCGAGTACACAGGAATTCTTGGTAGGACAGAAGACGTGGACTGCGTATTGGAAAACAACTATATTTTTGAGATAGATTGCTTGCAAACAATCAAGGGTCTTGGTGGAAGGGAGAGGCGGTCAAAAAATGTAGCATATGCTTCAAGTTTGCTGGAAAAATACAATGACCAAGATTCTGAAAGTGCGCCAGAGTTTTGCATTGATGCAGGGTCTACTGGAAATGTTGCTAGGTTTATAAACCATTGTTGTGAGCCTAATTTGTTTGTACAATGTGTTTTGAGCACACACTATGATTTGCGATTGGCTCGAGTGGTGCTGTTTGCCGCTGACAACATACCCCCTTTACAGGAGCTGACATATGACTATGGCTATGCACTTGATAGCGTCTTGGACTCTGATGGGAAGGTAAAGCAAATGGCGTGCTATTGTGGAGCTGCAGGCTGCAGGAAGCGATTATTCTAA 1788 0.4312 MEVWNEKMVAETENAGGALSDKSSTAKVKETIRTFNKHYLHLVQVEEERVAKEIAEFEKTNGGKKSAAKKKSRGKKSPKKDAKTKEEKHPSKRPSKRPDLKVITKMMQNNEILYPGKRIGSIPGIEVGYQFYSRAEMVAVGFHSHWLNGIDFIGKSYSKMYKLNLPVAVAIVISGMYEDDLDNAEDVVYTGQGGHNLTGNKRQIQDQKLERGNLALKNCCKQEVPVRVIRGHNSSSSYTRKVYTYDGLYKVDKYWADKGLSGFTVYKFRLRRVEGQPTLTTNQVYFTMGRVPQSTAEIRGLICEDITNGQETVPIPATNLVDDPPVPPPPGFKYLKSLKVAKSVRLPVSASGCKCNGKCIDPNTCECAKSNGSEFPYVSKDGGRLIEAKDVVFECGPNCGCGPECVNRTSQRGLQYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGILGRTEDVDCVLENNYIFEIDCLQTIKGLGGRERRSKNVAYASSLLEKYNDQDSESAPEFCIDAGSTGNVARFINHCCEPNLFVQCVLSTHYDLRLARVVLFAADNIPPLQELTYDYGYALDSVLDSDGKVKQMACYCGAAGCRKRLF* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1668 595 ProSiteProfiles Pre-SET domain profile. 351 413 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr6g1668 595 ProSiteProfiles Post-SET domain profile. 579 595 IPR003616 -
Mtr6g1668 595 Pfam SET domain 427 565 IPR001214 GO:0005515
Mtr6g1668 595 MobiDBLite consensus disorder prediction 79 99 - -
Mtr6g1668 595 MobiDBLite consensus disorder prediction 56 99 - -
Mtr6g1668 595 Pfam Pre-SET motif 306 408 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr6g1668 595 SMART preset_2 303 400 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr6g1668 595 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 17 594 - -
Mtr6g1668 595 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 17 594 - -
Mtr6g1668 595 SUPERFAMILY SET domain 299 571 IPR046341 -
Mtr6g1668 595 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 595 IPR025794 GO:0016571
Mtr6g1668 595 SMART set_7 416 571 IPR001214 GO:0005515
Mtr6g1668 595 ProSiteProfiles SET domain profile. 416 565 IPR001214 GO:0005515
Mtr6g1668 595 SUPERFAMILY PUA domain-like 102 292 IPR015947 -
Mtr6g1668 595 MobiDBLite consensus disorder prediction 1 26 - -
Mtr6g1668 595 Gene3D - 102 290 IPR036987 -
Mtr6g1668 595 Gene3D SET domain 296 595 IPR046341 -
Mtr6g1668 595 ProSiteProfiles YDG domain profile. 120 272 IPR003105 -
Mtr6g1668 595 Pfam SAD/SRA domain 119 276 IPR003105 -
Mtr6g1668 595 SMART G9a_1 115 276 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1668 Mtr-Chr6 30887991 30890119 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1668 106 595 EF-hand Containing Proteins AT5G13960 67.821 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr6g1668 SAD_SRA 1.2e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1668 K11420 - gmx:100795584 905.975