Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1666 ATGATGCAAAATAATGAGATACTATACCCTGGCAAAAGAATTGGCAGCATTCCAGGCATAGAGGTTGGATATCAGTTCTATTCTCGTGCTGAAATGGTTGCAGTTGGTTTTCATAGCCATTGGTTAAATGGCATTGATTTTATCGGCAAATCTTATTCTAAAACGTACAAGCTCAATCTCCCAGTTGCTGTGGCCATTGTTATTTCAGGCATTTATGAGGATGATCTGGATAATGCTGAAGATGTTGTGTACACTGGTCAAGGTGGGCATAATCTGACTGGTAATAAGCGTCAAATTCAAGATCAAAAGTTGGAGCGGGGTAATTTAGCACTCAAGAACTGCTGCAAGCAAGAAGTGCCAGTAAGGGTGATTCGAGGTCATAATTCAAGTAGTAGTTACACTCGTAAAGTCTACACATATGATGGTTTGTACAAGGTTGACAAATGTTGGGCAGAGAAGGGATTGTCTGGCTTCACAGTATACAAGTTTCGTCTGAGGCGGGTCGAAGGACAGCCTACATTAACAACAAATCAGGTCTATTTCACAATGGGACGTGTACCTCAGTCTACAGCAGAAATACGAGGGTTGATCTGTGAGGATATCACTAACGGCCAGGAAGTTGTTCCCATTCCAGCTACAAATTTGGTTGATGACCCACCTGTTCCACCTCCCCCAGGTTTCAAATATTTGAAGTCTCTGAAGGTTGCAAAAAGTGTTAAGCTTCCTGTGAGTGCCTCTGGATGCAAATGCAATGGCAAATGTATTGATCCAAACACCTGTGAATGTGCGAAGCGCAATGGCTCTGAATTTCCATATGTATCTAAAGATGGTGGTAGACTAATTGAAGCTAAAGACGTTGTGTTTGAATGTGGTCCCAATTGTGGCTGTGGTCCTGAGTGCGTGAATAGGACTTCTCAAAGAGGACTTCAATATCGTCTAGAGGTTTTCCGTACTGCAAAGAAAGGATGGGCTGTTAGATCCTGGGATTTTATACCTTCCGGTGCACCAGTTTGTGAGTACACAGGAATTCTTGGTAGGACAGAAGACGTGGACTGCGTATTGGAAAACAACTATATTTTTGAGATAGATTGCTTGCAAACAATCAAGGGTCTTGGTGGAAGGGAGAGGCGGTCAAAAAATGTAACATATGCTTCAAGTTTGCTGGAAAAATACGATGACCAAGATTCTGAAAGTGCGCCAGAGTTTTGCATTGATGCAGGGTCTACTGGAAATGTTGCTAGGTTTATAAACCATTGTTGTGAGCCTAATTTGTTTGTACAATGTGTTTTGAGCACACACAATGATTTGCGATTGGCTCGAGTGGTGCTGTTTGCCGCTGACAACATACCCCCTTTACAGGAGCTGACATATGACTATGGCTATGCACTTGATAGCGTCTTGGACTCTGATGGGAAGGTAAGGCAAATGGCGTGCTATTGTGGAGCTGCAGGCTGCAGGAAGCGATTATTCTAA 1473 0.4297 MMQNNEILYPGKRIGSIPGIEVGYQFYSRAEMVAVGFHSHWLNGIDFIGKSYSKTYKLNLPVAVAIVISGIYEDDLDNAEDVVYTGQGGHNLTGNKRQIQDQKLERGNLALKNCCKQEVPVRVIRGHNSSSSYTRKVYTYDGLYKVDKCWAEKGLSGFTVYKFRLRRVEGQPTLTTNQVYFTMGRVPQSTAEIRGLICEDITNGQEVVPIPATNLVDDPPVPPPPGFKYLKSLKVAKSVKLPVSASGCKCNGKCIDPNTCECAKRNGSEFPYVSKDGGRLIEAKDVVFECGPNCGCGPECVNRTSQRGLQYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGILGRTEDVDCVLENNYIFEIDCLQTIKGLGGRERRSKNVTYASSLLEKYDDQDSESAPEFCIDAGSTGNVARFINHCCEPNLFVQCVLSTHNDLRLARVVLFAADNIPPLQELTYDYGYALDSVLDSDGKVRQMACYCGAAGCRKRLF* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1666 490 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 16 489 - -
Mtr6g1666 490 ProSiteProfiles Post-SET domain profile. 474 490 IPR003616 -
Mtr6g1666 490 ProSiteProfiles YDG domain profile. 15 167 IPR003105 -
Mtr6g1666 490 Pfam SAD/SRA domain 14 171 IPR003105 -
Mtr6g1666 490 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 490 IPR025794 GO:0016571
Mtr6g1666 490 Pfam Pre-SET motif 201 303 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr6g1666 490 SMART preset_2 198 295 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mtr6g1666 490 Pfam SET domain 322 460 IPR001214 GO:0005515
Mtr6g1666 490 SMART G9a_1 10 171 IPR003105 -
Mtr6g1666 490 Gene3D - 1 185 IPR036987 -
Mtr6g1666 490 SUPERFAMILY PUA domain-like 2 187 IPR015947 -
Mtr6g1666 490 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 16 489 - -
Mtr6g1666 490 SUPERFAMILY SET domain 194 466 IPR046341 -
Mtr6g1666 490 Gene3D SET domain 191 490 IPR046341 -
Mtr6g1666 490 ProSiteProfiles SET domain profile. 311 460 IPR001214 GO:0005515
Mtr6g1666 490 SMART set_7 311 466 IPR001214 GO:0005515
Mtr6g1666 490 ProSiteProfiles Pre-SET domain profile. 246 308 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1666 Mtr-Chr6 30840900 30842634 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1666 1 490 EF-hand Containing Proteins AT5G13960 67.413 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr6g1666 SAD_SRA 8.7e-51 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1666 K11420 - gmx:100796701 830.091