Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1663 ATGGAAGAAAGAGAGATTTTTGGTTCTGGGCATGCTGTTAATGTTAACCAGGCCCCACCTGGCTTCAATTTAGCTCAAAATACGTTGAATTTTGCTGGGTCCACGGGAGAGTTACCGGCTCCGGTGCCGGTTGCCGGTGGCGTGGAGGTGAAGAAGAAGAGGGGCAGGCCTAGAAAGAGTGAATCTGGAAGTAAGCCGGCGTTGTCACCGATGCCAATTTCGGCTTCCATTCCGTTGACCGGTGATTTTTCAGGTTGGAAAAGTGGTGGTGGTGGAGGTGGAGGTGTAGTGAAGCCATTTGAATCAATTAAGAAGCCTTTGAAGTTGAATGATTTTGATGAAGGTAATTTTGATGAAGATAATGGAATATCACCCTTTGGTTCCAATTTCAAAACACACGTGCTTACTGTAAATTCTGGAGAGGATGTCTCGATGAAAATAATGTCTCTTTCTCAACAAGAATATCATACTATATCCATTCTGTCTGCGACTGGCACAATTTCGAATGTAACACTTCGCCAGTCGGATGCTTGTGGCGGTACTTCAACGTATGAGGGAGTTTTCGAGATTCTTTCCTTGAGCGGCTCATTTGTGCCAACCGAGAATGGATTGACAAAGAGCAGATCTGGTAGAATGAGTGTCTCACTGGCAGGTCCAAATGGTCGTGTTTTTGGGGGTGCACTGGCTGGTTTGCTGGTAGCTGCTGGTTCTGTGCAGGTTGTGGTTGCGAGTTTTTTTCCAGAGAAGGAGAATCCAAAGAGGCAGAGGGTCGATCATTCGGCACCAACTGCCCCTCCTACATCATCTCATATTAACAATCATGTTTCTGCCGAAGAATTGAGAACTGATATTGGTGGAATGAAGCCTATCATGTCACCGGCAGGTTTTAACTTCGCTTCTTTCGGCAATGGCCAAGGCTCTGGCAACTCATCATCATCTGCGGATGATGAGCATGTCTAA 960 0.4625 MEEREIFGSGHAVNVNQAPPGFNLAQNTLNFAGSTGELPAPVPVAGGVEVKKKRGRPRKSESGSKPALSPMPISASIPLTGDFSGWKSGGGGGGGVVKPFESIKKPLKLNDFDEGNFDEDNGISPFGSNFKTHVLTVNSGEDVSMKIMSLSQQEYHTISILSATGTISNVTLRQSDACGGTSTYEGVFEILSLSGSFVPTENGLTKSRSGRMSVSLAGPNGRVFGGALAGLLVAAGSVQVVVASFFPEKENPKRQRVDHSAPTAPPTSSHINNHVSAEELRTDIGGMKPIMSPAGFNFASFGNGQGSGNSSSSADDEHV* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1663 319 SUPERFAMILY AF0104/ALDC/Ptd012-like 128 247 - -
Mtr6g1663 319 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 8 297 - -
Mtr6g1663 319 Gene3D - 131 260 - -
Mtr6g1663 319 CDD DUF296 131 245 IPR005175 -
Mtr6g1663 319 MobiDBLite consensus disorder prediction 299 313 - -
Mtr6g1663 319 MobiDBLite consensus disorder prediction 251 275 - -
Mtr6g1663 319 MobiDBLite consensus disorder prediction 299 319 - -
Mtr6g1663 319 Pfam Plants and Prokaryotes Conserved (PCC) domain 131 245 IPR005175 -
Mtr6g1663 319 MobiDBLite consensus disorder prediction 38 73 - -
Mtr6g1663 319 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 8 297 IPR039605 GO:0003680
Mtr6g1663 319 MobiDBLite consensus disorder prediction 261 275 - -
Mtr6g1663 319 ProSiteProfiles PPC domain profile profile. 127 267 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1663 Mtr-Chr6 30759002 30764462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1663 50 257 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 55.000 5.19e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1663 - - cam:101510032 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1663 6 30759002 30764462 Mtr6g1663 6 30759002 30764462 ECH
Mtr6g1663 6 30759002 30764462 Mtr1g2695 1 38114343 38119190 PCT