Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1634 ATGGCTGAACAAATCCCATATGCTGTTGCTGCTAGCCTCATTAACAGGTTGGCTTCTGCAGCTTTTCATGAGTTTGGACGGATTCATGGTGTTATGCATGAGTTGGAAAGGCTTAAGAATACTGTTGAATCCGTCAGAGCTGTGCTCCTTGATGCTGAGGAGAAACAACAACAAAGTCATGGTGTGCAAAACTGGATAAGAAGACTCAAAGATGATGTGCTTCATCCTGCTGATGATTTGCTAGATGAATTTTCTATTGAAGACATGAGACACAAACGGGATGAAGCTCGCAAGAACAAAGTGACACAGGTACTTCATCGCTTATCTCCAAATAGAATTGCTTTTAGCCGTAAAATGGCTCATGAGATTGAAAAAATACAAACAAAATTTAATGACGTGGTGAAAGATATGTCTGGGTTGAATCTAAACTCAAATGTTGTGGTGGTTGAGCAAAGTGACATTGTAAGGAGGGAAACAAGTTCTTTTGTGTCAGAATCAGATATCATCGGAAGAGAAGATGATAGAAATAAGATCATAAGCTTGTTGAGGCAATCACATGAAAATCAGAATGTCTCCTTGGTTGCTATTGTAGGGATTGGCGGTTTGGGAAAGACAGCTCTTGCTCAATTGGTATACAATGATGGTGAAGTAACAAAGTCTTTTGAAAAGAGGATGTGGGTATGTGTCTCTAATAACTTTGATGTCAAAACTATTCTAAAGAACATGTTGAAGTCATTAAACATCAAGAATGAAGAGATTGACAATTTATCATTTGATAACTTGCAAAAAATGCTTCGTGACAATTTAACTGGTAAGAGATACTTGCTACTTCTTGATGACGTTTGGAATGAGAGTTTAGAAAAGTGGGATCAATTGAAGACTTATTTGATGTGTGGTGCTCAAGGTAGTAAGGTTGTAGTGACGACTCGTTCTAAAATTGTGGCACAAACAATGGGTGTAAGTGTCCCCTATACTTTGAATGGTTTGACTCCAGAGAAATCTTGGTGTTTGTTGAAGAACATCACATACAGGGATGAGACCAAAGGAGTTTTGAACCAAAATCTTGAAGCAATTGGTAAGAAGATAGCTGAAAAGTGCAGTGGTGTTCCACTAGCAATCAGAACATTAGGAGGCCTTTTACAAGGTAAAAGTGAAGAAACGGAATGGGTTGGTGTTTTACAAGATGACTTTTGGAAATTATGTGAAGACGAAGAAACCATCATGCCAGTGTTGAAACTGAGTTACCAAAACTTATCGCCTCAACTAAGACAATGTTTTTCTTACTGCTCTTTATATCCTAAGGATTGGGAAATAAAAAAGGATGAGTTGATTCAACTGTGGATGGCACAAGGTTATCTTGAATGTTCAACTCAAAAACAGGGTCCGGAAGATATTGGTAACCAATTCGTAAAGATTTTCTTGATGAAGTCATTCTTCCAAGATGCTAAAATTGATGATTGTGGTGATATATGTAGTTTCAAAATGCATGATTTAATGCATGATCTTGCAATGCAAATAGCCGGCAATGATTGTTGTTACATAGGTAGTGAGACAAAAAGACTTGCAGGAAGTCCCATTCATGTAATGTTGAAGTTGGATTTTATTGGTTGGTTAGAGTCGTTGGATGCAAGCAGGTTGCGGACTTTGATTTTGTTGCATAGCGATTTGCCTTATCGTGGGTGTGAAAAATTGTCTGTTATTTTAAAATTCAATCGCTTGCGTGTCTTGATGGTGAAACCTTTATGTAAAATTAAGTTGCGTGATTTCATTGTAAAATTGAAGCATTTAAGATATCTTAACTTCTCGCAAAGAAAAAGTCATGGAAGTGATAAAAAAGCCTTCACTAATGCTGTTTACCTACAAACACTAATATTGACGCTGTGTGACGAAAGATTTTCTCAAAAAAATGTCTCAAATTTAATCAATTTGAGACATCTTAAAATTGAGGTTCTACCCCCGCCACCCCCCTGGCCAAAGGAGGCAAAATCTAGCAGATTTGCAGAACTGTGTGTGGGGAAGGTTCTTCCCATCTTTCGAGAACTGCGTGTGGGGAAGGTTCACAAGTGTGCAATTTTTTCCAAAGGGTATTCTTTACTCTCAAATATTGTTGAAATCTCTCTCACAGATTATAATGGTTTGCCATATCTCCCACCAATGGAACGTCTACCATTTCTTAAATCACTTAAAATTCGTTATCTTCCTAAATTGGAGTATATACTTTATGAAGAGCCTCTTTTGTGTGGATCATTCTTCCCATCTTTGGAGAAGCTAATTATTGAGGATTGTTTGGAACTGAGAGGATGGAGGAGGATGGGGGATGATATCAATGATGATGATAACACCTCACAATCTCACCATCTCTCTTTCCCTCCTTTTTCTTCTCGTCTTTCACTAATCGAAATCACTTACTGTCGAATATTGACATGCATGCCTACTTTTCCAAACCTTGATAAGAAATTGGAATTAGTAAGCTCTTGTGTGGAGCCATGA 2490 0.3775 MAEQIPYAVAASLINRLASAAFHEFGRIHGVMHELERLKNTVESVRAVLLDAEEKQQQSHGVQNWIRRLKDDVLHPADDLLDEFSIEDMRHKRDEARKNKVTQVLHRLSPNRIAFSRKMAHEIEKIQTKFNDVVKDMSGLNLNSNVVVVEQSDIVRRETSSFVSESDIIGREDDRNKIISLLRQSHENQNVSLVAIVGIGGLGKTALAQLVYNDGEVTKSFEKRMWVCVSNNFDVKTILKNMLKSLNIKNEEIDNLSFDNLQKMLRDNLTGKRYLLLLDDVWNESLEKWDQLKTYLMCGAQGSKVVVTTRSKIVAQTMGVSVPYTLNGLTPEKSWCLLKNITYRDETKGVLNQNLEAIGKKIAEKCSGVPLAIRTLGGLLQGKSEETEWVGVLQDDFWKLCEDEETIMPVLKLSYQNLSPQLRQCFSYCSLYPKDWEIKKDELIQLWMAQGYLECSTQKQGPEDIGNQFVKIFLMKSFFQDAKIDDCGDICSFKMHDLMHDLAMQIAGNDCCYIGSETKRLAGSPIHVMLKLDFIGWLESLDASRLRTLILLHSDLPYRGCEKLSVILKFNRLRVLMVKPLCKIKLRDFIVKLKHLRYLNFSQRKSHGSDKKAFTNAVYLQTLILTLCDERFSQKNVSNLINLRHLKIEVLPPPPPWPKEAKSSRFAELCVGKVLPIFRELRVGKVHKCAIFSKGYSLLSNIVEISLTDYNGLPYLPPMERLPFLKSLKIRYLPKLEYILYEEPLLCGSFFPSLEKLIIEDCLELRGWRRMGDDINDDDNTSQSHHLSFPPFSSRLSLIEITYCRILTCMPTFPNLDKKLELVSSCVEP* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1634 829 Pfam NB-ARC domain 172 417 IPR002182 GO:0043531
Mtr6g1634 829 PANTHER DISEASE RESISTANCE PROTEIN RP 34 767 IPR044974 GO:0006952
Mtr6g1634 829 SUPERFAMILY L domain-like 480 816 - -
Mtr6g1634 829 Gene3D - 415 505 IPR036388 -
Mtr6g1634 829 CDD RX-CC_like 7 138 IPR038005 -
Mtr6g1634 829 Pfam Rx N-terminal domain 11 98 IPR041118 -
Mtr6g1634 829 Coils Coil 35 55 - -
Mtr6g1634 829 Gene3D - 153 322 IPR027417 -
Mtr6g1634 829 PANTHER OS05G0414200 PROTEIN 34 767 - -
Mtr6g1634 829 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 429 IPR027417 -
Mtr6g1634 829 Gene3D Ribonuclease Inhibitor 568 826 IPR032675 -
Mtr6g1634 829 PRINTS Disease resistance protein signature 193 208 - -
Mtr6g1634 829 PRINTS Disease resistance protein signature 268 282 - -
Mtr6g1634 829 PRINTS Disease resistance protein signature 366 380 - -
Mtr6g1634 829 PRINTS Disease resistance protein signature 749 765 - -
Mtr6g1634 829 Gene3D - 10 130 - -
Mtr6g1634 829 Gene3D - 328 414 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1634 Mtr-Chr6 29780707 29784859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1634 190 426 WRKY Transcription Factor Family AT5G45050 26.506 9.49e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1634 - - mtr:MTR_8g027540 971.459