Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1628 ATGTCACCGAAGAAGAAATGGATATGGTGTTGTTGCGTGATCGTGATCTGTTGTGCTAGGGTTTGTTCATCTGGTAGATCCGATAAAGAAACGCGTGATAGGTTTTATGGGAACATGCTTAATTCTACTGCTCCTGAATCTAATGATGGTTCTTTGGCTAAAATGTTCGATCGTGTTCTTGAGAAAGAGTTTTCTGAAAATGATCAACCTGAAGAGCCTGATAAAAACAGCTTCAATAGCACTGTGGCTGATCAGCAGGGAGTATTGGAGACTGTAGCTAAAATTACTCATGATAAAGCTAAGAGAAATGATACGCGTGAGGGAAATGGCACAAGATCATTTCAGTTTCAAGACGTGTTCTCTTTGGAAAATGAGGATTCTGATGATGTGACAACCTTGATTGACAAAAAGGACAATGTCTTTGTGATGTCAAACAAGAAATCCAAATATCCCGTGCTTCAAGTCGATTTGAGGCTAATATCAGATTTGGTGGTCATCATCGTTTCTGCAGCCATCGGTGGAATTGTCTTTTCCTGTTTGGGGCAACCGGTTATTGTGGGCTATCTTCTTGCAGGCTCCCTCATTGGACCAGGGGGTTTGAAATTCATTAGTGAAATGGTTCAGGTTGAAACGGTCGCACAATTTGGGGTGGTATTTCTTCTGTTTGCTTTGGGGCTGGAGTTTTCCTTGGCCAAGTTAAAAGCTGTGGGGCCTGTTGCTGTTCTTGGAGGGCTACTTCAAATTGTAATATTCATGTTCCTTTGTGGAATTCTTGCCATGTTATGTGGAGGAAAATTGTCTGAGGGTGTTTTTGTTGGTTCCTTTCTGTCAATGTCATCAACAGCAGTGGTGGTAAAGTTTTTGGTGGAGAGGAATACTAATAATGCTCTTCATGTTCAAGTTACAATTGGCACTCTTATTTTTCAGGACTGTGCTGTGGGTTTACTATTTGCTTTGCTCCCTGTCTTGGGTGGTAACAGTGGTCTTTTACAAGGGATTATTTCAATGGGAAAACTGTTGCTAGTATTGTCCTTGTATCTCACTGCTACATCTGTACTGTCTTGGTCGTTTGTTCCTCGCTTTCTAAAACTAATGATGAGGCTTTCATCTCAGACAAATGAACTTTATCAGCTAGCTGCTGTTGCTTTCTGCTTGTTATCTGCATGGTGCAGTGATAAGCTTGGTCTTAGTCTTGAGCTGGGTTCATTTATGGCTGGTGTTATGATTTCTACAACAGACTTTGCTCAACATACTTTGGACCAGGTGGAACCGATTCGTAACCTTTTTGCAGCTCTCTTCCTCTCAAGTATTGGAATGCTTATACATGTGCAGTTCCTTTGGAACCATGTGGATATCTTGCTTGCATCTGTTATTTTGGTTGTTGTTGTTAAGACTGCTGTTGTTGCTATAGTTACAAAGGCCTTCGGGTACAGTCTTAAGACAGCATTTATTGTTGGTATCTCACTTGCTCAAATTGGAGAATTTGCTTTTGTTCTGCTGAGTCGTGCTTCAAATCTTCATCTTGTTGAGGGGAAAATGTATCTTCTCCTTCTAGGGACGACGGCTCTCAGTCTGGTCACCACACCGCTTTTGTTTAAATTGATACCGGCTGTCATGAATCTGGGTGTTCTCATGCACTGGTTCCCTTCAGAAAATGGCACACAAATTGAGGGCAAATCTTTGATGATTGAGGCAAACAGAATGTTGTGA 1710 0.4152 MSPKKKWIWCCCVIVICCARVCSSGRSDKETRDRFYGNMLNSTAPESNDGSLAKMFDRVLEKEFSENDQPEEPDKNSFNSTVADQQGVLETVAKITHDKAKRNDTREGNGTRSFQFQDVFSLENEDSDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVIIVSAAIGGIVFSCLGQPVIVGYLLAGSLIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLAKLKAVGPVAVLGGLLQIVIFMFLCGILAMLCGGKLSEGVFVGSFLSMSSTAVVVKFLVERNTNNALHVQVTIGTLIFQDCAVGLLFALLPVLGGNSGLLQGIISMGKLLLVLSLYLTATSVLSWSFVPRFLKLMMRLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAQHTLDQVEPIRNLFAALFLSSIGMLIHVQFLWNHVDILLASVILVVVVKTAVVAIVTKAFGYSLKTAFIVGISLAQIGEFAFVLLSRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPAVMNLGVLMHWFPSENGTQIEGKSLMIEANRML* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1628 569 Gene3D - 157 540 IPR038770 -
Mtr6g1628 569 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 28 560 IPR045158 GO:0015386|GO:0071805|GO:1902600
Mtr6g1628 569 PANTHER K(+) EFFLUX ANTIPORTER 6 28 560 - -
Mtr6g1628 569 Pfam Sodium/hydrogen exchanger family 164 533 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1628 Mtr-Chr6 29490004 29502329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1628 25 567 Antiporters AT5G51710 82.136 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1628 - - gmx:100799476 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1628 6 29490004 29502329 Mtr6g1628 6 29490004 29502329 ECH