Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1614 ATGGCTTACTCTAAAATTCTTCATTTCTCCATCCTTGTTATTAGCCTCCTCTTTTCTGCAACTATCATGGCACAAGACTCTCCATTATATTTGAATACAATTTGTCCCAACAACGTTACCAAACCCAGCAGCACCTTCCAAAGCAATCTCTTAAACCTCTTCTCTTCATTGTCATCAAAAGCCAAAGGAAACACCAAATTCTACAACCATACAGTCACTAGTATAAATCCTTCTGAGTCCGTCTATGGATCGTTCATGTGTAGAGGTGACATACCGTCTCTGCTATGTCAGGACTGCATAGTTAAAGCAACCAATCAGCTATCCTCAGCGTGCTCTTTGTCCAAACAAGCTGTGATTTGGTACGGCGAGTGCATGGTTCGATACTCTAACATATCTTTCTTTTCCACGATCGATATGATGCCAGGTTTTCACTGGTGCAATACCGCCAATGTCACAAACACGAAGAGCTTTGTGTCTTTATTGTTTACAACCATGAATCGAACTGTAGATGAAGCAGCAAGTCCACTTATTGGTGACAAAAACGAGAAGTTTGCAACCAAAGAAGCACAAGATTCGGAAAATCAGACCCTTTACTGTCTAGCTCAGTGCACGCCGGATTTGTCGCCTAATGATTGCAGAACCTGTCTCAGTAGTGCTATTGAGAAAGTTTCAAAGAGTTGTGATGGAAAGGTGGGAGGGAGATTTCTTTATCCTAGCTGTAATGTAAGGTATGAATTATATCCATTTTATAGGTCTATTACTGTTCTTTCACCAAATGAGCTAGCTCCTCGAACAAATGATTCCAAACAAGATTCTAAACTTTCAGAAGAATCATTTTATCTTTCCTATAATTGCTCAAGAAACCACAACACAATCACTGACAAAAACATCAAATTACTTCTGTCTTATTTGTTGTCGAACGCCACCATCGGCAAAAAATTTCATAGCCTTAAAGTGGAAGAAATTGTGTATGGTCTCTTCATGTGTCGAGGTGATCTTCCTTCTAGACTCTGTGTTCAATGCGTCAAAAACGCAACGGAAGAACTATACTCAAAGTGTCAATACTCCCCACAGGGTATAATTTGGTACAGCCATTGCTTACTTCGCTATTCAAATCAGTATTTCTTCAATCACTTTGAAACAAGACCTATGTTTAGCGATATAAATGTTACCAATGATCCCATCCCGGACCAAAACTTGTTCACAAATGCATTATCAAATCAATTATCCGAACTTGTCAATGTTACGGGGAACAATGATGAAAAATTTACGACAAATTCATTGATATTGAATGATAAACAAACCTTGTATACTGTTGAACAATGTACAAAAGATTTGTCAACTGACGAATGCAATTCATGTCTAAATGATATGATCAGTAAAGAAATTCCATGGTCATTTTTGGGAAGTGTTGGAGGAAGAATCTTATATCCTAGCTGCAATCTGAGGTTTGAATTGTTCAAATTTTACATGGACGGCGACGAAGCTCTACTCCCTACAAGACATGCAGAGAAGAAGACAATTATATTCATTGTTGTCCCTATTATTATTTTGGTGATGCTCTTTTCTATTGGCTACTTTTTGATAAAGAGATGGAGAAGAAAGAGTCGCAAGACTATTCTTCGAGAAAATTTTGGTGAAGAAAGTGCGACTTTAGAACCACTACAATTCGATTGGATGGTAATTGAAGCAGCAACAAACAACTTTTCTAAGGACAATTACCTTGGCAAAGGAGGATTTGGAGAGGTTTACAAGGGTATCCTTTCTGATGGACGAGAAGTAGCTATAAAGAGGCTTTCAAGAAGTTCTAAGCAAGGTGTAGAGGAGTTCAAGAATGAAATTTTATTGATAGCCAAGCTTCAACACAGAAATCTAGTCACATTTATTGGTTTTTGCCTTGAAGGACATGAGAAGATACTTATTTATGAATATGTTTCCAACAAAAGTCTTGATTACTTTTTATTTGATTCTCAACAGCAAAAGTTGTTAACTTGGGTTGAACGCTTTAACATCATAGGAGGAATTGCTGGAGGAATTCTTTATTTGCATGAACATTCTCGACTCAAAGTTATACATCGTGATCTCAAACCAAGTAATATTCTATTAGATGAAAATATGATTCCTAGAATTTCAGATTTTGGTTTGGCACGAATGGTCGAAATAAGTCAAGACGAAGGAAGTACAAATAGAATTGTTGGAACATATGGTTATATGTCGCCAGAATATGCAATGTTTGGACAATTTTCTGAAAAATCAGATGTTTATAGTTTTGGAGTCATGATCCTAGAGATTGTAGCTGGAAAGAAGAATATAAGTTCATATGAACCACAACATGTTGCTAATAGCCTCTTGAATTCTGTATGGAGACAGTGGATGGATAAAACACCTTTAAATATATTGGACCCAAATATTAAAGGAGATTATTCTAAAACTGAAGTCATTAAGTGCATTCAGATTGGTCTATTATGTGTTCAAAATGACCCAGAGGCTAGACCTTCAATCTTGACAATTGCTTCTTATCTTAGCAGTCATTCAATTGAGTTACCAACTCCACAACAACCTGCATTTTTCCTGCAAGGTAGAAATTATAATGAATATGCCAATAGTTCTGCCCTATTCTCTAGCAATGGAATGCCTTCAACTACTTTTTTTCCTCGATAG 2661 0.3687 MAYSKILHFSILVISLLFSATIMAQDSPLYLNTICPNNVTKPSSTFQSNLLNLFSSLSSKAKGNTKFYNHTVTSINPSESVYGSFMCRGDIPSLLCQDCIVKATNQLSSACSLSKQAVIWYGECMVRYSNISFFSTIDMMPGFHWCNTANVTNTKSFVSLLFTTMNRTVDEAASPLIGDKNEKFATKEAQDSENQTLYCLAQCTPDLSPNDCRTCLSSAIEKVSKSCDGKVGGRFLYPSCNVRYELYPFYRSITVLSPNELAPRTNDSKQDSKLSEESFYLSYNCSRNHNTITDKNIKLLLSYLLSNATIGKKFHSLKVEEIVYGLFMCRGDLPSRLCVQCVKNATEELYSKCQYSPQGIIWYSHCLLRYSNQYFFNHFETRPMFSDINVTNDPIPDQNLFTNALSNQLSELVNVTGNNDEKFTTNSLILNDKQTLYTVEQCTKDLSTDECNSCLNDMISKEIPWSFLGSVGGRILYPSCNLRFELFKFYMDGDEALLPTRHAEKKTIIFIVVPIIILVMLFSIGYFLIKRWRRKSRKTILRENFGEESATLEPLQFDWMVIEAATNNFSKDNYLGKGGFGEVYKGILSDGREVAIKRLSRSSKQGVEEFKNEILLIAKLQHRNLVTFIGFCLEGHEKILIYEYVSNKSLDYFLFDSQQQKLLTWVERFNIIGGIAGGILYLHEHSRLKVIHRDLKPSNILLDENMIPRISDFGLARMVEISQDEGSTNRIVGTYGYMSPEYAMFGQFSEKSDVYSFGVMILEIVAGKKNISSYEPQHVANSLLNSVWRQWMDKTPLNILDPNIKGDYSKTEVIKCIQIGLLCVQNDPEARPSILTIASYLSSHSIELPTPQQPAFFLQGRNYNEYANSSALFSSNGMPSTTFFPR* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1614 886 SMART serkin_6 569 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1614 886 Gene3D Phosphorylase Kinase; domain 1 530 644 - -
Mtr6g1614 886 Coils Coil 886 886 - -
Mtr6g1614 886 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 500 866 - -
Mtr6g1614 886 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 16 260 - -
Mtr6g1614 886 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 271 491 - -
Mtr6g1614 886 ProSitePatterns Protein kinases ATP-binding region signature. 575 597 IPR017441 GO:0005524
Mtr6g1614 886 ProSiteProfiles Gnk2-homologous domain profile. 27 133 IPR002902 -
Mtr6g1614 886 Pfam Salt stress response/antifungal 38 130 IPR002902 -
Mtr6g1614 886 Pfam Salt stress response/antifungal 397 485 IPR002902 -
Mtr6g1614 886 Pfam Salt stress response/antifungal 146 247 IPR002902 -
Mtr6g1614 886 Pfam Salt stress response/antifungal 291 373 IPR002902 -
Mtr6g1614 886 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 500 866 - -
Mtr6g1614 886 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 271 491 - -
Mtr6g1614 886 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 260 - -
Mtr6g1614 886 ProSiteProfiles Gnk2-homologous domain profile. 381 489 IPR002902 -
Mtr6g1614 886 ProSiteProfiles Gnk2-homologous domain profile. 275 375 IPR002902 -
Mtr6g1614 886 Pfam Protein kinase domain 570 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1614 886 Gene3D Transferase(Phosphotransferase) domain 1 645 850 - -
Mtr6g1614 886 CDD STKc_IRAK 575 841 - -
Mtr6g1614 886 Gene3D - 384 489 IPR038408 -
Mtr6g1614 886 Gene3D - 28 133 IPR038408 -
Mtr6g1614 886 Gene3D - 278 375 IPR038408 -
Mtr6g1614 886 Gene3D - 141 249 IPR038408 -
Mtr6g1614 886 ProSiteProfiles Protein kinase domain profile. 569 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1614 886 SUPERFAMILY Protein kinase-like (PK-like) 552 876 IPR011009 -
Mtr6g1614 886 ProSiteProfiles Gnk2-homologous domain profile. 139 249 IPR002902 -
Mtr6g1614 886 ProSitePatterns Serine/Threonine protein kinases active-site signature. 690 702 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1614 Mtr-Chr6 29265544 29278375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1614 286 859 Receptor kinase-like Gene Family AT4G05200 43.760 3.94e-166 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr6g1614 Pkinase 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1614 - - mtr:MTR_6g055960 1222.22