Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1612 ATGATTGCAAATCAACCAAATTCCATGGCTTCCTCTAAAATTTTCTTTTTCTCTATGTTTGTTAGTTTCTTCTATTTTGCCACTATTAAGGCACAAGACCCTCCTGTTTACCTTGTCATCAAACGTTGTTCCCCCAACGACAATACCACAATCAACAGCACCTTCCAAATCAATCTTAACACCCTTCTCTCTACCTTGTCATCAAAAGCCATAGACAACACTGAATTCTACAACACCACAGTCACTAGTGTAAATCCCACTGATTCTGTCTATGGATTGTTCATGTGCAGGGGTGACGTCTACTCTCAACTCTGTCATGAATGCGTAGTTAATGCTACTCAAAAATTGTCCTTAGACTGCCCTTTATCAAAACAAGCCGTGATTTATTACGACGATTGTCTTGTTCGTTACTCAGATAACTATTTCTTTTCCACCCTTACAATAAGTCCTGGTATTGACATCTTCAACCAATACAACGTATCTAACACAAAAAGCTTCATGCCTATATTGTTTTCGACGATGAATAAAACTGCAGAGAAAGCAGCGGGTCCACTTACTGGTGACAAGGACACGAAGTTTGCCACGATAGAAAAACAGATTTCTGAATCTCAAACGCTTTACTGTCTAGCTCAGTGCACGCCAGACTTGTCGTTCAATGATTGCAGAACCTGCCTCGGTTGTGCTATTAGGAAACTTTCAAATGTGTATGATGGAAAGCAGGGTGGGAGAAATTTATATCCTAGTTGTAATATTAGGTATGAGCTATATCCTTTTTATAGATCTACTAATGCTCCTTCACTAAATGAGCTTGTTCCTCAAACAAATGATTCAAAACAAGATTCTAATTTTACACAAGATCCAGTTTATCTTTCCGATAATTGCCCAAGAAACCACAGTACAATCACTAACAAAAACTTCAAATTACTTCTCTCTTATTTGTCTTCCAACGCCACAAATGGCACAACATTCCATATTGCTAAAGTGGAAGAAAAGGTGTACGGCCTCTTCTTGTGTCGAGGTGACCTTCCTAATCGCCTCTGTGGTCAATGTGTAAAAAATGCTGCGGAACAAATATACTCAAAGTGTCTTTCTTGCCCAAAGGGTATAATTTGGTACAGCCACTGCTTGCTTCGCTATTCTGATCGGAAATTCTTCTCTAACATCGAAACAAGTCCTATGTATAGAGATATAAATATCACCGAAGATTCCATCACATACCAAAACTCGTTCACTAGTACATTATCAAATCAGTTATATCAACTTGCGAATGACACAGGGGACAGTGATGAAATGTATCTGACTAATTCATTAAAACTGAATGATAAACAAACCTTGTATAGTCTTGGACAATGTACGAGAGATTTGTCTAGTGAGGATTGCGCTTCTTGTCTAAATACTGTGATCGTTACAGCAATTCCATGGCCAAATTTGGGCAGTGTTGGGGGAAGAATTATGTATCCTAGCTGTAATCTGAGGTTTGAATTGTTTCCTTTTTACATGGACAAAGCTCAGCCGCCTGGGAGTCCTTCCCCATTACCAGGAAATGCAGAGAAACAGAAAATTATCTTCATTGTTGTCCCTACCATTGTTTTGGTGATGCTCTTTTCTATTGGCTGCTATTTGCTTAAGAAAAGGGGAAGAAAGAGTCGTAGGACTATTCTTCGAGAAAATTTTGGTGAAGAAAGTGCCACATTAGAGCCACTGCAATTCGACTGGGTGGTTATTGAAGCAGCAACCAAGAACTTTTCTACGGACAATTATATTGGCAAAGGCGGGTTCGGAGAGGTTTATAAGGGTATCCTTCTTGATGGAAGAGAAGTGGCTATAAAAAGGCTTTCAAAAAGTTCAAACCAAGGTGTAGAAGAGTTCAAGAATGAAGTTTTATTGATAGCCAAGCTTCAACATAGAAATCTAGTGGCATTTATTGGATTTTGCCTTGAAGAACAAGAGAAAATACTTATTTATGAATTTGTGCCCAACAAGAGTCTTGATTACTTTCTATTTGATTCTCAACAACAAAAGTTGTTAACTTGGGTTGAACGCTTCAACATCATAGGAGGAATTGTCCGAGGGATTCTTTATTTGCATGATCATTCACGGCTCAAAGTTATACATCGGGATCTCAAACCTAGCAATATTCTATTAGACGAAAATATGATTCCTAAAATTTCTGATTTTGGTTTGGCTCGAATTGTTGAAATAAGTCAAGATGAGGGAAGTACAAATAGAATTGTTGGAACATTTGGTTATATGTCTCCGGAATATGCAATGGTCGGACAATTTTCTGAAAAATCCGACATTTATAGTTTTGGAGTTATGCTTTTAGAGATTATTGCTGGAAAGAAGAATAAAAGTTCATTTACTCCACACCATGTTGCTTATGACCTCTTGAATTATGTATGGAGACAATGGATGGATCAAACACCTTTAAGTATTTTGGACCCAAATATTCAAGAAGATTATTCTACAAATGAAGTCATTAAGTGCATTCAGATTGGTCTATTATGTGTTCAACATGACCCGGATGCTAGACCTTCAATCTCGACAGTTTCTTCTTACCTTAGCAGTTATGCAGTTGAATTACCAACTCCGAAAGAACCTGCGTTTTTCTTGCATGGTAGAAAGAATTCAAACATTCTTGCACAAGAATCAAGTTCTACTCAATCTGCCAATAGCTCTGCACTATTCTCAAACAATCAAATGTCCGCAAGTACTTTTATTCCTCTATAG 2730 0.3777 MIANQPNSMASSKIFFFSMFVSFFYFATIKAQDPPVYLVIKRCSPNDNTTINSTFQINLNTLLSTLSSKAIDNTEFYNTTVTSVNPTDSVYGLFMCRGDVYSQLCHECVVNATQKLSLDCPLSKQAVIYYDDCLVRYSDNYFFSTLTISPGIDIFNQYNVSNTKSFMPILFSTMNKTAEKAAGPLTGDKDTKFATIEKQISESQTLYCLAQCTPDLSFNDCRTCLGCAIRKLSNVYDGKQGGRNLYPSCNIRYELYPFYRSTNAPSLNELVPQTNDSKQDSNFTQDPVYLSDNCPRNHSTITNKNFKLLLSYLSSNATNGTTFHIAKVEEKVYGLFLCRGDLPNRLCGQCVKNAAEQIYSKCLSCPKGIIWYSHCLLRYSDRKFFSNIETSPMYRDINITEDSITYQNSFTSTLSNQLYQLANDTGDSDEMYLTNSLKLNDKQTLYSLGQCTRDLSSEDCASCLNTVIVTAIPWPNLGSVGGRIMYPSCNLRFELFPFYMDKAQPPGSPSPLPGNAEKQKIIFIVVPTIVLVMLFSIGCYLLKKRGRKSRRTILRENFGEESATLEPLQFDWVVIEAATKNFSTDNYIGKGGFGEVYKGILLDGREVAIKRLSKSSNQGVEEFKNEVLLIAKLQHRNLVAFIGFCLEEQEKILIYEFVPNKSLDYFLFDSQQQKLLTWVERFNIIGGIVRGILYLHDHSRLKVIHRDLKPSNILLDENMIPKISDFGLARIVEISQDEGSTNRIVGTFGYMSPEYAMVGQFSEKSDIYSFGVMLLEIIAGKKNKSSFTPHHVAYDLLNYVWRQWMDQTPLSILDPNIQEDYSTNEVIKCIQIGLLCVQHDPDARPSISTVSSYLSSYAVELPTPKEPAFFLHGRKNSNILAQESSSTQSANSSALFSNNQMSASTFIPL* 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1612 909 ProSiteProfiles Gnk2-homologous domain profile. 284 384 IPR002902 -
Mtr6g1612 909 Pfam Salt stress response/antifungal 43 139 IPR002902 -
Mtr6g1612 909 Pfam Salt stress response/antifungal 161 256 IPR002902 -
Mtr6g1612 909 Pfam Salt stress response/antifungal 303 381 IPR002902 -
Mtr6g1612 909 Pfam Salt stress response/antifungal 406 494 IPR002902 -
Mtr6g1612 909 ProSiteProfiles Gnk2-homologous domain profile. 37 142 IPR002902 -
Mtr6g1612 909 Gene3D - 36 142 IPR038408 -
Mtr6g1612 909 Gene3D - 288 384 IPR038408 -
Mtr6g1612 909 Gene3D - 151 258 IPR038408 -
Mtr6g1612 909 Gene3D - 393 498 IPR038408 -
Mtr6g1612 909 SMART serkin_6 582 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1612 909 ProSitePatterns Protein kinases ATP-binding region signature. 588 610 IPR017441 GO:0005524
Mtr6g1612 909 SUPERFAMILY Protein kinase-like (PK-like) 565 892 IPR011009 -
Mtr6g1612 909 ProSiteProfiles Protein kinase domain profile. 582 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1612 909 ProSitePatterns Serine/Threonine protein kinases active-site signature. 703 715 IPR008271 GO:0004672|GO:0006468
Mtr6g1612 909 ProSiteProfiles Gnk2-homologous domain profile. 148 258 IPR002902 -
Mtr6g1612 909 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 278 503 - -
Mtr6g1612 909 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 23 269 - -
Mtr6g1612 909 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 512 900 - -
Mtr6g1612 909 Gene3D Transferase(Phosphotransferase) domain 1 658 863 - -
Mtr6g1612 909 CDD STKc_IRAK 588 854 - -
Mtr6g1612 909 Gene3D Phosphorylase Kinase; domain 1 545 657 - -
Mtr6g1612 909 ProSiteProfiles Gnk2-homologous domain profile. 392 498 IPR002902 -
Mtr6g1612 909 Pfam Protein kinase domain 584 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1612 909 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 512 900 - -
Mtr6g1612 909 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 269 - -
Mtr6g1612 909 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 278 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1612 Mtr-Chr6 29232996 29236788 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1612 284 895 Receptor kinase-like Gene Family AT4G05200 45.426 8.69e-180 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr6g1612 Pkinase 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1612 - - mtr:MTR_6g055960 1396.72