Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1605 ATGGCTTACTCTAGAATTCTCTTTTTCTCAATCCTTATTCGATTCCTTTGTTTTGCAACTATCAAGGCACAGGACTCTATTTGTTCCTCCAATGGGACCACAACCAATAGCACCTACCAAATCAATACCAGGACACTCCTCTCTTCATTGTCATCAAAAGCCACCGGCAACACCGAATTCTACAACACCACAGTCACCACAGGAGACCACTCTAATTCTGTCTATGGATTGTTCATGTGCAGGGGTGATGTCACCTTTCAAATCTGTGATGAATGCATAGTTAATGCAACTCAAAAACTTTCCTTAGATTGCCCATTATCCAAACAAGCTGTAATTTATTACGAAAATTGCATGGTTCGATACTCCAGCGAGTCTTTCTTTTCCACTGTTGATACACATCATAGTCTTTTTATGTCGAGCATTCTCAATGTCTCAAACACAGAAAGCTTCATGCCTTTATTGTTTTCGACGATGGATAAAACTGCAGAGGAAGCAGCAGGTCCACTTACTACTGACAACAACAAGAAGTTTGCCACAAAAGAAGCAAGGATTTCTGAATCTCAGACCCTTTACTGTCTAGCTCAGTGCACGCCGGACTTGTCACCCGGTGATTGCAGAACCTGTCTCAATAGTGCTATTGAGAAACTTCCTAGCTGTTGTGATGGAAAGGTGGGTGGGAGAGTTCTTTTTCCTAGCTGTAATGTTAGGTATGAATTATATCCTTTTTATAGGTCTATTAATGCTCCTTCGCCAAATGAGCTTGTTCCTCAAACAAATCATTCAAACCAAGATTCTAGATTTTCACAAGATCCAATTTATCTTTCCTATAATTGCTCAAGAAACAACAGTACAATCACTAACAATAACTTCAAATTACTTCTCTCTTATCTGTCCTCCAACGCCACAAATGGCGAAAAATTTTATACTGTTAAAGTGGATGAAATGGTGTACGGCCTCTTCTTGTGTCGAGGTGACCTTCCTGTTCGCCTCTGTGGTCAATGTGTAAAAAATGCAACTGACCAAATATACTCAAAGTGTCTTTCATCTCCAAAGGGTATAATTTGGTACAGCCACTGCTTGCTTCACTACTCTGATCGAAAGTTCTTCTCTAACGTCGAAACAAGTCCTATGTATAGCGATATAAATATCACCAAAGATTCCATCACAAACCAAAACTTGTTCACTAGTACATTATCAAATCAGTTATCTCAACTTGCGAATGATACAGGGGACAGTGGTGAAAGATATAAGACTAATTCATTAAAACTAAATGATGTACAAACCTTGTATACTCTTGGACAATGTACGCAAGATTTGTCTAGTCAGGATTGCACTTCTTGTCTAAATGATGTGATCAATACAGCGATTCCATGGTCAAATTTGGGTAGTGTTGGGGGAAGAATTATATATCCTAGCTGCAATCTGAGGTTTGAATTGTTCCAATTTTACATGGACGGCGACGAAGCTATACCGCCTGGAAGTCCTCCATTATCAGGAAATGAAGATAAACAGAAAATTGTCTTCATTGTTGTCCCTACAATTATTTCGGTGATGCTATTTTCTATTGGCTACTATTGGCTTAAGAAAAGGGGAAGAAAGAGTCAAAGGACTATTCTTCGAGAAAATTTTGGTGAAGAAAGTGCGACTTTAGAACCACTACAATTCGATTGGGTGGTAATTGAAGCAGCAACCAACAACTTTTCTACTCACAATTACATTGGCAAAGGCGGGTTTGGAGAGGTTTACAAGGGTATCCTTCTTGATGGACGAGAAGTCGCTATAAAAAGGCTTTCAAAAAGTTCTAATCAAGGTGTAGAAGAGTTCAAGAATGAAGTTTTGTTGATAGCCAAGCTTCAACATAGAAATCTAGTTGCTTTTATTGGTTTTTGCCTTGAAGAAAAAGAGAAAATACTTATTTATGAATATGTGCCAAACAAAAGTCTTGATTTCTTTCTATTTGATTCTCAACAACAAAAGTTGTTAACTTGGGTTGAACGCTTCAATATCATAGGAGGAATTGTTCGAGGACTTCTTTATTTGCATGAACATTCCCGACTGAAAGTTATACACCGGGATCTCAAACCTAGCAATATTCTATTAGACGAAAATATGATTTCTAAAATTTCAGATTTTGGTTTGGCTCGAATTGTTGAAATAAGTCAAGATGAGGGAAGTACAGATAGAATTGTTGGAACATTTGGTTATATGTCTCCGGAATATGTAATGTTCGGACAATTTTCTGAAAAATCCGACATTTATAGTTTTGGAGTTATGCTTTTAGAGATTATTGCTGGAAAGAAGAATAAAAGTTCGTTTACTCCACATCATGTTGCTGATGGCCTCTTGAATCATGTATGGAGACTGTGGATGGAGCAAACACCTTTAAGTATACTGGATCCAAATATTAAAGAAGATTATTCTACAAATGAAGTCATTAAGTGCATTCAGATTGGTCTATTATGTGTTCAACATGACCCGGATGCCAGACCTTCGATCGTGACAGTTGCTTCTTATCTTAGCAGTTATGCAGTTGAATTACCAACTCCACCAGAACCTGCGTTTTTCTTGCATGGTAGAACTTATTCAAATGTTCTTGCACAAGAATCAAGTTCTACTCAATCTACCAATAGTTCTGCATTATTCTCAAACAATCAAATGTCGGCAAGTACTTTTATTCCTCGATAG 2685 0.3773 MAYSRILFFSILIRFLCFATIKAQDSICSSNGTTTNSTYQINTRTLLSSLSSKATGNTEFYNTTVTTGDHSNSVYGLFMCRGDVTFQICDECIVNATQKLSLDCPLSKQAVIYYENCMVRYSSESFFSTVDTHHSLFMSSILNVSNTESFMPLLFSTMDKTAEEAAGPLTTDNNKKFATKEARISESQTLYCLAQCTPDLSPGDCRTCLNSAIEKLPSCCDGKVGGRVLFPSCNVRYELYPFYRSINAPSPNELVPQTNHSNQDSRFSQDPIYLSYNCSRNNSTITNNNFKLLLSYLSSNATNGEKFYTVKVDEMVYGLFLCRGDLPVRLCGQCVKNATDQIYSKCLSSPKGIIWYSHCLLHYSDRKFFSNVETSPMYSDINITKDSITNQNLFTSTLSNQLSQLANDTGDSGERYKTNSLKLNDVQTLYTLGQCTQDLSSQDCTSCLNDVINTAIPWSNLGSVGGRIIYPSCNLRFELFQFYMDGDEAIPPGSPPLSGNEDKQKIVFIVVPTIISVMLFSIGYYWLKKRGRKSQRTILRENFGEESATLEPLQFDWVVIEAATNNFSTHNYIGKGGFGEVYKGILLDGREVAIKRLSKSSNQGVEEFKNEVLLIAKLQHRNLVAFIGFCLEEKEKILIYEYVPNKSLDFFLFDSQQQKLLTWVERFNIIGGIVRGLLYLHEHSRLKVIHRDLKPSNILLDENMISKISDFGLARIVEISQDEGSTDRIVGTFGYMSPEYVMFGQFSEKSDIYSFGVMLLEIIAGKKNKSSFTPHHVADGLLNHVWRLWMEQTPLSILDPNIKEDYSTNEVIKCIQIGLLCVQHDPDARPSIVTVASYLSSYAVELPTPPEPAFFLHGRTYSNVLAQESSSTQSTNSSALFSNNQMSASTFIPR* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1605 894 Gene3D - 377 482 IPR038408 -
Mtr6g1605 894 Gene3D - 271 368 IPR038408 -
Mtr6g1605 894 Gene3D - 20 126 IPR038408 -
Mtr6g1605 894 Gene3D - 133 242 IPR038408 -
Mtr6g1605 894 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 262 486 - -
Mtr6g1605 894 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 19 254 - -
Mtr6g1605 894 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 497 885 - -
Mtr6g1605 894 ProSiteProfiles Gnk2-homologous domain profile. 132 242 IPR002902 -
Mtr6g1605 894 ProSiteProfiles Gnk2-homologous domain profile. 376 482 IPR002902 -
Mtr6g1605 894 Gene3D Transferase(Phosphotransferase) domain 1 643 846 - -
Mtr6g1605 894 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 254 - -
Mtr6g1605 894 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 497 885 - -
Mtr6g1605 894 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 262 486 - -
Mtr6g1605 894 ProSitePatterns Serine/Threonine protein kinases active-site signature. 688 700 IPR008271 GO:0004672|GO:0006468
Mtr6g1605 894 Gene3D Phosphorylase Kinase; domain 1 529 642 - -
Mtr6g1605 894 CDD STKc_IRAK 573 839 - -
Mtr6g1605 894 ProSiteProfiles Protein kinase domain profile. 567 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1605 894 Pfam Protein kinase domain 569 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1605 894 ProSiteProfiles Gnk2-homologous domain profile. 268 368 IPR002902 -
Mtr6g1605 894 ProSitePatterns Protein kinases ATP-binding region signature. 573 595 IPR017441 GO:0005524
Mtr6g1605 894 Pfam Salt stress response/antifungal 285 365 IPR002902 -
Mtr6g1605 894 Pfam Salt stress response/antifungal 147 240 IPR002902 -
Mtr6g1605 894 Pfam Salt stress response/antifungal 389 478 IPR002902 -
Mtr6g1605 894 Pfam Salt stress response/antifungal 28 123 IPR002902 -
Mtr6g1605 894 SMART serkin_6 567 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1605 894 ProSiteProfiles Gnk2-homologous domain profile. 21 126 IPR002902 -
Mtr6g1605 894 SUPERFAMILY Protein kinase-like (PK-like) 550 879 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1605 Mtr-Chr6 29045654 29049581 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1605 268 878 Receptor kinase-like Gene Family AT4G05200 43.566 7.07e-173 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr6g1605 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1605 - - mtr:MTR_6g055960 1751.49