Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1600 TTTGTAGATTTTCAACAACAAAAGTTGTTAACTTGGGTTGAACGCTTCAGTATCATAGGTGGAATTGTTCGAGGACTTCTTTATTTGCATGAACATTCTCGACTCAAAGTTATACATCGGGATCTCAAACCTAGCAATATTCTATTAGACGAAAATATGATTCCTAAAATTTCAGATTTTGGTTTGGCTCGAATTATTGAAATAAGTCAAGATGAGGGAAGTACAGATAGAATTGTTGGAACATTTATTTATATGTCTCCGGAATATGTAATGTTTGGACAATTTTCTGAAAATTCCGACATTTATAGTTTTGGAGTTATGCTTTTAGAGATTATTGCTGAAAAGAAGAATAAAAGTTCGTTTACTCCACATCATGTTGCTGATGGCCTCTTAAATCATGTATGGAGACGGTGGATGGAGGAAACACCTTTAAGTATACTGGATCCAAATATTGAAGAAGATTATTCTACAAATGAAGTCATTAAGTGCATTCAGATTGGTCTATTATGTGTTCAAAATGACCCGGATGCTAGACCTTCGATCGTGACAGTTGCTTCTTATCTTAGCATTTATGCAGTTGAATTACCAACTCCACCAGAACCTGCGTTTTTCTTGCATGGTAGAGGGATTCAAACGTTCTTGCACAAGAATCTAGTTCTACTCAATCTGCCCATAGTTCTGCATTATTTTCAAACAATCAAATGTCGGCAAGTAAATTTTATGAAAAGGATTTAG 735 0.3483 FVDFQQQKLLTWVERFSIIGGIVRGLLYLHEHSRLKVIHRDLKPSNILLDENMIPKISDFGLARIIEISQDEGSTDRIVGTFIYMSPEYVMFGQFSENSDIYSFGVMLLEIIAEKKNKSSFTPHHVADGLLNHVWRRWMEETPLSILDPNIEEDYSTNEVIKCIQIGLLCVQNDPDARPSIVTVASYLSIYAVELPTPPEPAFFLHGRGIQTFLHKNLVLLNLPIVLHYFQTIKCRQVNFMKRI* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1600 244 SMART serkin_6 1 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1600 244 Gene3D Transferase(Phosphotransferase) domain 1 2 194 - -
Mtr6g1600 244 Pfam Protein kinase domain 14 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1600 244 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 211 - -
Mtr6g1600 244 ProSiteProfiles Protein kinase domain profile. 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1600 244 ProSitePatterns Serine/Threonine protein kinases active-site signature. 37 49 IPR008271 GO:0004672|GO:0006468
Mtr6g1600 244 SUPERFAMILY Protein kinase-like (PK-like) 5 214 IPR011009 -
Mtr6g1600 244 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 3 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1600 Mtr-Chr6 28927078 28928031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1600 3 211 Receptor kinase-like Gene Family AT4G23140 52.093 7.48e-73 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr6g1600 Pkinase 3.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1600 - - mtr:MTR_6g055960 396.741