Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1598 ATGATTCCTAAAATTTCAGATTTTGGTTTGGCTCGAATTGTTGAAATAAGTCAAGATGAGGGAAGTACAGATAGAATTGTTGGAACATTTGGTTATATGTCTCCGGAATATGTAATGTTTGGACAATTTTCTGAAAAATCCGACATATATAGTTTTGGAGTTATGCTTGTAGAGATTATTGCTGGAAAGAAGAATAAAAGTTCGTTTACTCCACATCATGTTGCTGATGGCCTCTTGAATCATGTATGGAGACGGTGGATGGAGGAAACACCTTTAAGTATACTGGATCCAAATATTAAAGAATATCATTCTACAAATGAAGTCATTAAGTGCATTTAG 339 0.3392 MIPKISDFGLARIVEISQDEGSTDRIVGTFGYMSPEYVMFGQFSEKSDIYSFGVMLVEIIAGKKNKSSFTPHHVADGLLNHVWRRWMEETPLSILDPNIKEYHSTNEVIKCI* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1598 112 ProSiteProfiles Protein kinase domain profile. 1 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1598 112 Pfam Protein tyrosine and serine/threonine kinase 4 76 IPR001245 GO:0004672|GO:0006468
Mtr6g1598 112 SUPERFAMILY Protein kinase-like (PK-like) 2 94 IPR011009 -
Mtr6g1598 112 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 112 - -
Mtr6g1598 112 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1 112 - -
Mtr6g1598 112 Gene3D Transferase(Phosphotransferase) domain 1 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1598 Mtr-Chr6 28915949 28916819 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1598 1 112 Receptor kinase-like Gene Family AT4G11480 52.679 4.38e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr6g1598 PK_Tyr_Ser-Thr 2.4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1598 - - mtr:MTR_6g052970 231.876