Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1597 ATGGCTTACTCTAAAATTCTCTTTCTCTCAATCCTTATTCGATTCTTTTGTTTTGCAACTATCAAGGCACAGGACTCTACTTTTCTGTATTCCAATTGTTCCACCAATCGTACCACAGCCAATAGCACCTTCCAAACTAATCTCATGACCCTCCTTTCTTCCTTGTCATCAAAAGCCACAGGCAACACCGAATTCTACAACATCACAGGAAACCCCTCTGATTCTGTCTATGGATTGTTCATGTGCAGGGGTGATGTCACCTTTCAAATCTGTGATGAATGCATAGTTAATGCAACTCAAAAACTGTCCTTAGATTGCCCATTATCCAAACAAGCTGTAATTTATTACGAAAATTGCATGGTTCGATACTCCAATGAGTCTTTCTTTTCCACTGTTGATACAAATCCTTCGTTTGTAATGTGTAAGTCCGCCAACGTCTCAAACACGACAAGCTTCGAGCCTTTATTGTCTTCAACTATGCATCAAACTGCAGACATGTACAAGAAGCAGGCAACAAAAGATGCACGTCGACTTATTGGAACCATAAACAAGAACTTTGCAACAAGAGAAGCACGTTTCAAAAATCAGACCCTGTACTGTCTAGAACAGTGCACGCCGGACTTGTCCCCTAACAATTGCAGAACCTGTCTCCATAGAGCTATTGAATATCTTCCTATGGTTTGTGATGGAAAGGAGGGTGGGAGAGTTGTTTTTCCTAGCTGTAATATTAGGTATGAACTATATCCTTTTTATAGGTCTATCAATACTACTTCTTCACCAAATGAGCTTGTTCCGCCACCTGGGAATCCTTCTCCATTACTAGACAATGCAGTTGGTGAAGAAAGTGCGACTTTAGAACCACTACAATTCGATTGGGTGGTAATTGAAGCAGCAACCAACAACTTTTCTACTGACAATTACATTGGCAAAGGCGGGTTTGGAGAGGTTTACAAGGGAATACTTGTTGATGGACGAGAAGTGGCTATAAAAAGGCTTTCAAAAAGTTCTAATCAAGGTGTAGAAGAGTATAAGAATGAAGTTTTGTTGATAGCCAAGCTTCAACATAGAAATCTAGTGGCATTTATTGGTTTTTGCCTTGAAGAACAAGAGAAAATACTTATTTATGAATTTGTGCCCAACAAAAGTCTTGATTTCTTTCTATTTGATTCTCAAAAACAAAAGTTGTTAACTTGGGGTGAACGCTTCAACATCATAGGAGGAATTGTTCGAGGGATTCTTTATTTGCATGATCATTCACGACTCAAAGTTATACATCGGGATCTCAAACCTAGCAATATTCTATTAGACGAAAATATGATTCCTAAAATTTCAGATTTTGGTTTGGCTCGGATTGTTGAAATAAGTCAAGATGAGGGAAATACAAATAGAATTGCTGGAACATATGGTTATATGTCTCCGGAATATGCAATGCTTGGACAATTTTCTGAAAAATCTGACATTTATAGTTTTGGAGTTATGCTTTTAGAGATTATTGCTGGAAAGAAGAATAAAAGTCCATTTACTCCACACCATGTTGCTTATGACCTCTTGAATCATGTATGGAGACAGTGGATGGATCAAACACCTTTAAGTATATTGGACCCAAATATTAAAAAAGATTATTCTACAAATGAAGTCATTAAATGCATTCAGATTGGTCTGTTATGTGTTCAAAATGACCCGAATGCTAGACCTTCAATTGTGACAGTTGCTTCTTATCTTAGCAGTTATGCAATTGAATTACCAACTCCAAAAGAACCTGCGTTTCTCTTGCATGGTAGAACTTATTCCGACGTTCTTGCACAAGAATCAAGTTCTACTCAATCTGCCAATAGTTCTGCACTTTTCTCATACAATCAAATGTCTGCAAGTACTTTTATTCCTCGATAG 1890 0.3767 MAYSKILFLSILIRFFCFATIKAQDSTFLYSNCSTNRTTANSTFQTNLMTLLSSLSSKATGNTEFYNITGNPSDSVYGLFMCRGDVTFQICDECIVNATQKLSLDCPLSKQAVIYYENCMVRYSNESFFSTVDTNPSFVMCKSANVSNTTSFEPLLSSTMHQTADMYKKQATKDARRLIGTINKNFATREARFKNQTLYCLEQCTPDLSPNNCRTCLHRAIEYLPMVCDGKEGGRVVFPSCNIRYELYPFYRSINTTSSPNELVPPPGNPSPLLDNAVGEESATLEPLQFDWVVIEAATNNFSTDNYIGKGGFGEVYKGILVDGREVAIKRLSKSSNQGVEEYKNEVLLIAKLQHRNLVAFIGFCLEEQEKILIYEFVPNKSLDFFLFDSQKQKLLTWGERFNIIGGIVRGILYLHDHSRLKVIHRDLKPSNILLDENMIPKISDFGLARIVEISQDEGNTNRIAGTYGYMSPEYAMLGQFSEKSDIYSFGVMLLEIIAGKKNKSPFTPHHVAYDLLNHVWRQWMDQTPLSILDPNIKKDYSTNEVIKCIQIGLLCVQNDPNARPSIVTVASYLSSYAIELPTPKEPAFLLHGRTYSDVLAQESSSTQSANSSALFSYNQMSASTFIPR* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1597 629 SMART serkin_6 302 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1597 629 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Mtr6g1597 629 Gene3D Transferase(Phosphotransferase) domain 1 378 582 - -
Mtr6g1597 629 Gene3D - 134 250 IPR038408 -
Mtr6g1597 629 Gene3D - 24 128 IPR038408 -
Mtr6g1597 629 ProSiteProfiles Protein kinase domain profile. 302 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1597 629 CDD STKc_IRAK 308 574 - -
Mtr6g1597 629 SUPERFAMILY Protein kinase-like (PK-like) 285 612 IPR011009 -
Mtr6g1597 629 Pfam Salt stress response/antifungal 33 125 IPR002902 -
Mtr6g1597 629 Pfam Salt stress response/antifungal 141 248 IPR002902 -
Mtr6g1597 629 ProSiteProfiles Gnk2-homologous domain profile. 134 250 IPR002902 -
Mtr6g1597 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Mtr6g1597 629 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 261 - -
Mtr6g1597 629 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 274 620 - -
Mtr6g1597 629 Gene3D Phosphorylase Kinase; domain 1 275 377 - -
Mtr6g1597 629 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 274 620 - -
Mtr6g1597 629 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 15 261 - -
Mtr6g1597 629 Pfam Protein kinase domain 304 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1597 629 ProSiteProfiles Gnk2-homologous domain profile. 26 128 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1597 Mtr-Chr6 28856560 28860079 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1597 12 629 Receptor kinase-like Gene Family AT4G05200 43.953 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr6g1597 Pkinase 4.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1597 - - mtr:MTR_0074s0060 954.125