Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1595 ATGGCTGCATCACAATCCTCATCATCCATCACCAATGATGGATACGAATACGATGTTTTCCTCAACTTCAGAGGCCCTGATACACGTAGTGATTTTACAGGAAATCTTTGGAATGCTCTACATAACAGGGGGATCCGCACCTTCAGGGATGACTTGGAGATTTACAAAGGGAAAAATATCGAGAAATCACTTTTTGAAGCTATTGAAAAATCAAAGGCGGCCATTGTTGTTCTCTCTCCGAGTTATGCAACTTCATCTTTTTGTTTAGACGAACTTTGTCATATCCTTAAATGCATAGAGGGAAGGGGTGGATTTGTTTGGCCAATCTTTTATGAAGTTGACCCTTCAAAAGTGAGATGGTTAGAAGACACTTATGGAGAAGCAATGGCTGAACATAAGAAGAACAATTGGTATAGCGAAGATAAGTTGAAGGAATGGGAGAATGCTTTGAATCAAGTGGCTAATTTGTCTGGTACCGTTTACAAATGGAAGAAAGGGGATGGATATGAATACATGTTTATTGATAAGATTGTTCGAGTCGTCTCAACAGTGATACAACCTTTTTCTTTATCTATACCTGATTACCTAGTTGGGTTGGAGGACCAAAAACAAGATGTATTATCGCTTTTGAATGTTGACTCTGATGATAAGGTCTATATGGTTGGAATCCACGGAACCGGTGGAATAGGGAAAACAACTCTTGCTCAAGCGGTTTATAATTCAATTGTAGATCAATTTGATGGTTCGTGTTATCTTGAAGATGTAAGAGGAAAAACAGGGAATGAGGGGTTGATACATCTTCAAAATATCCTTCTTTCTAAAATATTTGGAGAAAATAAAATCGTGGTAACAAGTGTTAACGAGGGAATTAATGAACTTCAAGTTAGGCTAAAAAAAAAGAAAGTTCTTTTGCTTCTTGACAATGTTGACAAGTTGGATCAATTACGCAATATTGTTCGAGAACCCGGATGGTTTGGTCGTGGAAGTAGAGTTATGATCACGACCCGTGACATAGACGTGCTAAGAAGGCATGGGGTTGAAAGAAGACATGAGGTGAAAATGTTGAACAAGGATGAAGCTTACGATCTTCTTAGATGGAAAACTTTTCAAACTAATGAAGTTAGTCCAAGCTTTGAAGATGTTTTCAATCGTGCTTTAACCTATATCAGTGGCCTTCCATTAGCTATTGAAATAATCGGTTCTCACTTATTTTCAAAAAAAACAATAGAAGAATGGAACTCTGTGTTAGATCAGTACAAAAAGGTTCCTAACCAAGAGATCTTTGAGATTCTTAAAGTGAGCTACAATGATTTGGTCCAAGATTATAAAGATGTTTTTCTTGACATAGCTTGTTTCTTCAAAGGAGATAATTTGGAATATGTCAAAAAAATACTTCATGCTCATTATGGTGACGAGAAGAAAGATCATATCAATGTGTTAATTGAAAAATCTCTCATAAAGATAAGCGAGTTTAATGATTTGAGTTTACATGATCTGATAGAAGATATGGGAAAAGAAATTGTCAGACTAGAATCACCATATCAGCCTGGAGAACGCAGTAGATTATGGTCTGTTAAAGACATAGTTGAAGTTTTGGAGGAAAATACGGGAACAAGTAAAATTGGAACCATTATTATGCCTTGGGATATCAAGAAGGACAATGTAGTAAATTGGGATGGAGAGGCTTTTAAGAATATGACAAAGCTTAGAACACTTCTTATTGAAGGAGTTAAATTTTCTGAAAGTCCAAAGCATCTTCCAAATAGTTTAAGAATACTGGAGTGGTACGACTATCCATCACAGTATTTCCCGGTTGATTTTCTCCCGAGGCAACTCATCATATGCAAATTGAGCTCTGAATTTTATCGTCCTCGGGAAGACTTTTTCAAGAAGTACTGCAGGAATATGAGAATTTTACAGTTTCTTCATTGTAATTCTTTGAGATCGATACCTAATATGTCAGGTCTCCAAAATTTAGAAGAACTTTCATTTTGGAGGTGTCCGGAGTTAATTACATTTGATGACTCCATTGTTTTGCTGGGTAAACTTAAAATTTTGAATATCATAAACTGTGGTGAACTCAAATATATTCCACTCCTCAAATTAGCTTCATTGAAAAAACTCACTCTTTCAAATTTATATAGTATTAAGAGTTTTTCTCCCATGTTGAATGAGGCATTGGATAAACTTCAATTTTTGGAGGTCATCTGGTGTCCTTTTCTCAAATATATTCCACCTCTTAAATTAACTTCATTGAAAACACTCACTCTTTCACATATAGATCGCATTAAGAGTCTTTCTCCCATGTTGGACGAGTCATTGGATAAGCTTAAAATTTTGATGGTTGAATATTGTGCAAAGATCCAAACTATTCCATCTCTCAAATTACCTTCATTGGAGGAACTCACTCTTAGCAATTTATCTAGTATTGAGAGTCTTTCTCCCACGTTGGATGAGTCATTGGATAAGCTTAAAATTTTGGAGGTTGATGATTGTGGAAAGCTCCAAACTATTCCATCTCTCAAATTACCTTCATTGGAGGAACTCACTCTTAGCAATTTATCTAGTATTGAGAGTCTTTCTCCCATGTTGGATGAGTCGTTGGATAAGCTTAAAATTTTGAAGGTTGTTGATTGTGCAAAGATCCAAACTATTCCATCTCTCAAATTACCTTCATTGGAGGAACTCACTCTTAGCAATTTATCTAGTATTGAGAGTCTTTCTCCCACGTTGGATGAGTCGTTGGATAAGCTTAAAATTTTGAAGGTTGTTGAATGTGCAAAGATCCAAACTATTCCATCTCTCAAATTACCTTCATTGGAGGAACTCACTCTTCGCTATTTATCTAGTATTGAGAGTCTTTCTCCCATGTTGGATGAGTCATTGGATAAGCTTAAAATTTTGAAGGTTGTTGATTGTGCAAAGCTCCAAACTATTCCATCTCTCAAATTACCTTCATTGGAGAAACTCAGGCTTGGAAGTTTATCTAGTATTCAGAGTCTTTCTCCCATGTTGGATGAGTCGTTGGATAAGCTTAAAAGTTTGAAGGTTTTATTTTGTAAGAAGCTCCAAACTATTCCATCTCTCAAATTACCTTCATTGGAGAAACTCAGGCTTGGAAGTTTATCTAGTATTCAGAGTCTTTCTCCCATGTTGGATGAGTCGTTGGATAAGCTTAAAATTTTGATGGTTGATGGTTGTGAGAACCTCCAAGCTATTCCATCTCTCAAATTACCTTCGTTGGAGCAACTCTGGCTTGTAATTTTATTTAGTATTCAGAGTCTTTCTCCCATGTTAGATGAGTCGTTGGATAAGCTTAAAATTTTGGAGGTTCATGGTTGTGTGAACCTCCAAACTATTCCATCTCTCAAATTACCTTCATTGGAGAAACTCACTCTTAAAGGTTTATATGGTATTAAGAGTCTTTCTCCCATGTTGGATGAGTCATTGGATAAACTTAAAGTCTTGAATATTAGATATTGCTATGACCTGTGTAGTTTTCCACATGTCATGTTGCCTTCACTAGAAATCCTTAATCTTTTATATTGTTATTTTCTCGAGAGTTTTCCACCTGTCATGTTGCCTTCACTAGAAATCCTTGATCTTTCATATTGTAAATCTCTCGAGAGTTTTCCACGTATCACCAGTCGGTCAATGACTAAACTTAAAATATTGAGACTTGAAGGTTGTGAAAAGCTCAGGAATATTCATGCTATCAATGTGGATTCCTTAGATGAATTCGATTATTCAGGATGTGAGAGTCTCGAGTTTCCCACCTCTGACTGA 3786 0.3616 MAASQSSSSITNDGYEYDVFLNFRGPDTRSDFTGNLWNALHNRGIRTFRDDLEIYKGKNIEKSLFEAIEKSKAAIVVLSPSYATSSFCLDELCHILKCIEGRGGFVWPIFYEVDPSKVRWLEDTYGEAMAEHKKNNWYSEDKLKEWENALNQVANLSGTVYKWKKGDGYEYMFIDKIVRVVSTVIQPFSLSIPDYLVGLEDQKQDVLSLLNVDSDDKVYMVGIHGTGGIGKTTLAQAVYNSIVDQFDGSCYLEDVRGKTGNEGLIHLQNILLSKIFGENKIVVTSVNEGINELQVRLKKKKVLLLLDNVDKLDQLRNIVREPGWFGRGSRVMITTRDIDVLRRHGVERRHEVKMLNKDEAYDLLRWKTFQTNEVSPSFEDVFNRALTYISGLPLAIEIIGSHLFSKKTIEEWNSVLDQYKKVPNQEIFEILKVSYNDLVQDYKDVFLDIACFFKGDNLEYVKKILHAHYGDEKKDHINVLIEKSLIKISEFNDLSLHDLIEDMGKEIVRLESPYQPGERSRLWSVKDIVEVLEENTGTSKIGTIIMPWDIKKDNVVNWDGEAFKNMTKLRTLLIEGVKFSESPKHLPNSLRILEWYDYPSQYFPVDFLPRQLIICKLSSEFYRPREDFFKKYCRNMRILQFLHCNSLRSIPNMSGLQNLEELSFWRCPELITFDDSIVLLGKLKILNIINCGELKYIPLLKLASLKKLTLSNLYSIKSFSPMLNEALDKLQFLEVIWCPFLKYIPPLKLTSLKTLTLSHIDRIKSLSPMLDESLDKLKILMVEYCAKIQTIPSLKLPSLEELTLSNLSSIESLSPTLDESLDKLKILEVDDCGKLQTIPSLKLPSLEELTLSNLSSIESLSPMLDESLDKLKILKVVDCAKIQTIPSLKLPSLEELTLSNLSSIESLSPTLDESLDKLKILKVVECAKIQTIPSLKLPSLEELTLRYLSSIESLSPMLDESLDKLKILKVVDCAKLQTIPSLKLPSLEKLRLGSLSSIQSLSPMLDESLDKLKSLKVLFCKKLQTIPSLKLPSLEKLRLGSLSSIQSLSPMLDESLDKLKILMVDGCENLQAIPSLKLPSLEQLWLVILFSIQSLSPMLDESLDKLKILEVHGCVNLQTIPSLKLPSLEKLTLKGLYGIKSLSPMLDESLDKLKVLNIRYCYDLCSFPHVMLPSLEILNLLYCYFLESFPPVMLPSLEILDLSYCKSLESFPRITSRSMTKLKILRLEGCEKLRNIHAINVDSLDEFDYSGCESLEFPTSD* 1262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1595 1261 PANTHER ARCHAEAL ATPASE 27 861 - -
Mtr6g1595 1261 SUPERFAMILY L domain-like 548 768 - -
Mtr6g1595 1261 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 861 IPR044974 GO:0006952
Mtr6g1595 1261 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 158 IPR035897 -
Mtr6g1595 1261 Gene3D Ribonuclease Inhibitor 890 1077 IPR032675 -
Mtr6g1595 1261 ProSiteProfiles TIR domain profile. 15 185 IPR000157 GO:0007165
Mtr6g1595 1261 Gene3D - 354 439 IPR042197 -
Mtr6g1595 1261 SMART AAA_5 217 360 IPR003593 -
Mtr6g1595 1261 Gene3D - 10 185 IPR035897 -
Mtr6g1595 1261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 449 IPR027417 -
Mtr6g1595 1261 SUPERFAMILY "Winged helix" DNA-binding domain 426 533 IPR036390 -
Mtr6g1595 1261 Pfam TIR domain 17 181 IPR000157 GO:0007165
Mtr6g1595 1261 Gene3D Ribonuclease Inhibitor 1078 1246 IPR032675 -
Mtr6g1595 1261 Gene3D Ribonuclease Inhibitor 748 889 IPR032675 -
Mtr6g1595 1261 Gene3D Ribonuclease Inhibitor 552 747 IPR032675 -
Mtr6g1595 1261 SUPERFAMILY L domain-like 950 1255 - -
Mtr6g1595 1261 SUPERFAMILY L domain-like 703 1018 - -
Mtr6g1595 1261 SMART till_3 16 156 IPR000157 GO:0007165
Mtr6g1595 1261 PRINTS Disease resistance protein signature 220 235 - -
Mtr6g1595 1261 PRINTS Disease resistance protein signature 296 310 - -
Mtr6g1595 1261 PRINTS Disease resistance protein signature 389 403 - -
Mtr6g1595 1261 PRINTS Disease resistance protein signature 819 835 - -
Mtr6g1595 1261 Pfam NB-ARC domain 201 435 IPR002182 GO:0043531
Mtr6g1595 1261 Gene3D - 186 353 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1595 Mtr-Chr6 28825594 28835200 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1595 16 725 WRKY Transcription Factor Family AT4G12020 28.494 7.14e-58 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1595 - - mtr:MTR_0007s0140 1442.17