Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1594 ATGGCTGCATCACCATCCTCATCATCCATCACCAATGATGGATACGAATACGATGTTTTCCTCAGCTTCAGAGGCCCTGATACACGTAGTGATTTTACAGGAAATCTTTGGAATGCTCTACATAACAGGGGGATCCGCACCTTCAGGGATGACTTGGAGATTTACAAAGGGAAAAATATTGAGAAATCACTTTTTGAAGCTATTGAAAAATCAAAGGCGGCCATTGTTGTTCTCTCTCCGAGTTATGCAACTTCATCTTTTTGTTTAGACGAACTTTGTCATATTCTTAAATGCATAAAGGGAAGGGGTCGATTTGTTTGGCCAATCTTTTATGAAGTTGAACCTTCACATGTGAGATGGTTGGAAGAGAGTTATGGAGAAGCAATGGCTAAACATAAAGCGAGCAATGTTTATAGCGAAATTAAGTTGCAAGAATGGAAGAATGCTTTGAATCAAGTGGCTAATTTGTCTGGTACCGTTCACAAATGGAAGAGAGGGGATGGATATGAATACATGTTTATTAATAAGATTGTTCGAGTCGTCTCAACAGTGATACAATCTTTTTCTTTATCTATACCTGATTACCTAGTTGGGTTGGAGGATCAAAAACAAGATGTATTATCGCTTTTGAATATTGACTCTGATGATAAGGTCTATATGGTTGGAATCCATGGAATCGGTGGAATAGGGAAAACAACTCTTGCTCAAGCGGTTTATAATTCAATTGTAGATCAATTTGATGGTTCGTGTTATCTTGAAGATGTAAGAGGAAATAAAGAGAATCAGGGGTTGATACATCTTCAAAATATCCTTCTTTCTAAAATATTTGGAGAAAATAAAATTGTGGTAACAAGTGTTAACGAGGGAATTAAAGAACTTCAAGTTAAGCTCAAAGAAAAGAAAGTTCTTTTGCTTCTTGACAATGTTGACAAGTTGGATCAATTACGCGCTATTGTTGGAGAACCTGGATGGTTTGGTCGTGGAAGTAGAGTTATGATCACGACCCGTGACACACAAGTGCTAAGAAGTCATGGGGTTGAAAGAACACATGAGGTGAAAATGTTGAACAAGGATGAAGCTTACGATCTCCTTAGATGGAAAACTTTTCAAACTAATGAAGTTAGTCCAAGCTTTGAAGATGTTTTCAATCGTGCTTTAAAGTATACTAGTGGCCTTCCATTAGCTATTGAAATAATCGGTTCTCACTTATTTTCAAAAAAAAAAATAGAAGAATGGAACTCTGTGTTAGATCGGTACAAAAAGATTCCTAAGCAAGAGATCTTTGAGATTCTTAAAGTGAGCTTCGATGATTTGGTCCAAGATGATAAAGATGTTTTTCTTGACATAGCTTGTTTCTTCAAAGGACATTGTTTGGAAGAAGTCAAAAAAATACTTCATGCTCATTATGGTGACGAAAAGAAAGATCATATCAATGTGTTAATTGAAAAATCTCTCATAAAGATAAACGAGTCTAATGTTTTGAGATTACATGATCTGATAGAAGACATGGGAAAAGAAATTGTCAGACTAGAATCACCATATCAGCCTGGAGAACGCAGTAGATTATGGTCATCTAAAGACATAGTTGAAGTTTTAGAGGAAAATACGGGAACAAGTAAAATTGGAACCATTATTATGTTTTTAGATTTCAATGAGGAGATTGTAGTAAATTGGGATGGAGAGGCTTTTAAGAATATGACAAAGCTTAGAACACTTTTTATTGACGAAGGAGTTAAATTTTCTGAAAGTCCAAAGCATCTTCCAAATAGTTTAAGAATACTGTTGTGGGGGGGCTATCCATCAGAGTATTTCCCGGTTGATTTTTTCCCGAAGCAACTCACCATATGCATATTGAGCTCTGAATTGTATCGTCCTCGGGAAGACTTTTTCAAGAAGTACTTCAGGAATCTGAGAATTTTACACTTTCATGATTGTAATTCTTTGAGATCGATACCTGATATGTCAGGTCTCCAAAATTTAGAACAACTTTCATTTAGGAGGTGTCAGGAATTAATTACATTTGATGACTCCATTGGGTTGCTGGGTAAACTGAAAATTTTGAAGATCAAATACTGTGATCAACTCAAATATATTCCACTCCTCAAATTACCTTCATTGGAGGAACTCACTCTTAAAGGTTTATCTGGTATTAAGAGTCTTTCTTCCATGTTGAATGAGTCATTGGATAAACTTAAATTTTTGAAGGTCTGCCATTGTCATTATCTCGAATATATTCCACCTCTTAAATTAACTTCATTGGAAACACTCACTCTTTCAGCTTTATTTAGAATTAAGAGTCTTTCTCGCATTTTCGATGAGTCATTGGATAAGCTTAAAATTTTGAAGGTCGACGGTTGTGGAGAGATCAATACTATTCTAAATCTCAAAATAGTTTCATTGGAGGAACTCTATCTTTCAAATATATATATCATTAAGAGTCTTTCTCCCATGTTGGATGGGTCATTGGATAAGCTTAAAATTTTGGAGGTTTTTGAATGTGGAAATCTCCAAACTATTCCATCTCGCAAATTACCTTCATTGGAGGAACTCACTCTTAACTGTTTATCTAGTACTAAGAGTCTTTCTCCCATGTTGGATGAGTCATTGGATAAGCTTAAAATTTTGAAGGTTGTTGATTGTAGAAAGCTCCAAACTATTCCATCTCTCAAATTACCTTCATTGGAGGAACTCACTCTTAGTGGTTTAGATAGCATTGAGAGTCTTTCTTTCTTGTTGGATGAGTCATTGGATAAACTTAAAGTCTTGAGTATTAGACATTGCTATAAGCTGTGGAGTTTTCCACATGTCATGTTGCCTTCACTAGAAATCCTTGATCTTTCATATTGTGATTCTCTCGAGAGTTTTCCACGTATCATCAGTCGGTCAATGACTAAACTTAAAATATTGAGACTTAATGGTTGTAAAAAGCTCAGGAATATTCATGCTATCAATGTGGCTTCCTTAGATGAGTTCTATCATTCAGGATGTGAGAGTGTCAAGTTTACCACCTCTGACTGA 3018 0.3565 MAASPSSSSITNDGYEYDVFLSFRGPDTRSDFTGNLWNALHNRGIRTFRDDLEIYKGKNIEKSLFEAIEKSKAAIVVLSPSYATSSFCLDELCHILKCIKGRGRFVWPIFYEVEPSHVRWLEESYGEAMAKHKASNVYSEIKLQEWKNALNQVANLSGTVHKWKRGDGYEYMFINKIVRVVSTVIQSFSLSIPDYLVGLEDQKQDVLSLLNIDSDDKVYMVGIHGIGGIGKTTLAQAVYNSIVDQFDGSCYLEDVRGNKENQGLIHLQNILLSKIFGENKIVVTSVNEGIKELQVKLKEKKVLLLLDNVDKLDQLRAIVGEPGWFGRGSRVMITTRDTQVLRSHGVERTHEVKMLNKDEAYDLLRWKTFQTNEVSPSFEDVFNRALKYTSGLPLAIEIIGSHLFSKKKIEEWNSVLDRYKKIPKQEIFEILKVSFDDLVQDDKDVFLDIACFFKGHCLEEVKKILHAHYGDEKKDHINVLIEKSLIKINESNVLRLHDLIEDMGKEIVRLESPYQPGERSRLWSSKDIVEVLEENTGTSKIGTIIMFLDFNEEIVVNWDGEAFKNMTKLRTLFIDEGVKFSESPKHLPNSLRILLWGGYPSEYFPVDFFPKQLTICILSSELYRPREDFFKKYFRNLRILHFHDCNSLRSIPDMSGLQNLEQLSFRRCQELITFDDSIGLLGKLKILKIKYCDQLKYIPLLKLPSLEELTLKGLSGIKSLSSMLNESLDKLKFLKVCHCHYLEYIPPLKLTSLETLTLSALFRIKSLSRIFDESLDKLKILKVDGCGEINTILNLKIVSLEELYLSNIYIIKSLSPMLDGSLDKLKILEVFECGNLQTIPSRKLPSLEELTLNCLSSTKSLSPMLDESLDKLKILKVVDCRKLQTIPSLKLPSLEELTLSGLDSIESLSFLLDESLDKLKVLSIRHCYKLWSFPHVMLPSLEILDLSYCDSLESFPRIISRSMTKLKILRLNGCKKLRNIHAINVASLDEFYHSGCESVKFTTSD* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1594 1005 PANTHER ARCHAEAL ATPASE 27 865 - -
Mtr6g1594 1005 SUPERFAMILY L domain-like 547 880 - -
Mtr6g1594 1005 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 449 IPR027417 -
Mtr6g1594 1005 Pfam TIR domain 17 179 IPR000157 GO:0007165
Mtr6g1594 1005 Pfam NB-ARC domain 201 421 IPR002182 GO:0043531
Mtr6g1594 1005 Gene3D - 10 184 IPR035897 -
Mtr6g1594 1005 PRINTS Disease resistance protein signature 220 235 - -
Mtr6g1594 1005 PRINTS Disease resistance protein signature 296 310 - -
Mtr6g1594 1005 PRINTS Disease resistance protein signature 389 403 - -
Mtr6g1594 1005 PRINTS Disease resistance protein signature 936 952 - -
Mtr6g1594 1005 Gene3D Ribonuclease Inhibitor 727 863 IPR032675 -
Mtr6g1594 1005 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 158 IPR035897 -
Mtr6g1594 1005 Gene3D Ribonuclease Inhibitor 866 1004 IPR032675 -
Mtr6g1594 1005 Gene3D Ribonuclease Inhibitor 547 726 IPR032675 -
Mtr6g1594 1005 SUPERFAMILY L domain-like 868 996 - -
Mtr6g1594 1005 ProSiteProfiles TIR domain profile. 15 185 IPR000157 GO:0007165
Mtr6g1594 1005 SMART till_3 16 156 IPR000157 GO:0007165
Mtr6g1594 1005 Gene3D - 185 348 IPR027417 -
Mtr6g1594 1005 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 865 IPR044974 GO:0006952
Mtr6g1594 1005 SUPERFAMILY "Winged helix" DNA-binding domain 426 533 IPR036390 -
Mtr6g1594 1005 Gene3D - 354 439 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1594 Mtr-Chr6 28797247 28804817 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1594 218 839 WRKY Transcription Factor Family AT5G45050 30.044 3.60e-62 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1594 - - mtr:MTR_0007s0140 1915.58