Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1592 ATGATGGAAGAAAACAAGAAGTGGATGCATAAAGAGACAGAAAGACAAAGAAGGCAAGAGATGAGCAACCTATGCACCAACCTCAGATCCCTTCTTCCTATTGAATATATTAAGGGAAAACGTTCAATTTCTGATCATGTGAATGAAGCAATGCATTATATAAACCACTTACAAAACAAGGTGAAGCAATTACAAGATAAGAAGGAAGAGTTAATGAAGGTATCTAATTTGAGTAGAAATGTCACTACTCAAAATGGTTCTAGTAGTTCAAATATACAACCCTTTGTTATTGTTCAACCTTTTCCTGGAGGACTTGAGATTGTGTGCAGTTACAGCTTCAACAAGTGTTTGTTTCCTTTATCAAGAGTTTTAAGCATGCTGCTTAAAGAAGGGCTTAATTTGATAAGTTGTACTTCCAACATGATAGAAGGCAGATTCATATACACTATAAGATCCGAGGAACCGATAATGCCTGGAATTGATTATTCTGAACTGCAAAGAAAGCTCACCGAAGCAATATCATGCTCAAGTTTGCAAGAGAATTCATTTGAACCTGAAATTGACAATATCTTGAGATAA 579 0.3541 MMEENKKWMHKETERQRRQEMSNLCTNLRSLLPIEYIKGKRSISDHVNEAMHYINHLQNKVKQLQDKKEELMKVSNLSRNVTTQNGSSSSNIQPFVIVQPFPGGLEIVCSYSFNKCLFPLSRVLSMLLKEGLNLISCTSNMIEGRFIYTIRSEEPIMPGIDYSELQRKLTEAISCSSLQENSFEPEIDNILR* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1592 192 PANTHER TRANSCRIPTION FACTOR 2 181 - -
Mtr6g1592 192 Coils Coil 47 77 - -
Mtr6g1592 192 Gene3D - 1 86 IPR036638 GO:0046983
Mtr6g1592 192 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 4 75 IPR036638 GO:0046983
Mtr6g1592 192 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 5 57 IPR011598 GO:0046983
Mtr6g1592 192 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 2 181 IPR015660 GO:0003700|GO:0006357
Mtr6g1592 192 SMART finulus 11 63 IPR011598 GO:0046983
Mtr6g1592 192 Pfam Helix-loop-helix DNA-binding domain 7 58 IPR011598 GO:0046983
Mtr6g1592 192 CDD bHLH_AtORG2_like 6 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1592 Mtr-Chr6 28667493 28671828 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1592 6 169 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 41.176 7.63e-34 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr6g1592 HLH 1.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1592 - - gsj:114390355 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1592 6 28667493 28671828 Mtr6g1592 6 28667493 28671828 ECH
Mtr6g1592 6 28667493 28671828 Mtr1g3830 1 49881286 49882526 PCT