Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1591 ATGGAGCATACCACGTTTCCTTTACACCAGTTTTCTAATAGTCCCCACAAACAGCATCACAAAATCTCCCAGGATCTGATTCTTGATAATAATTATGCTTCTTTGCTTGTCAATAATTCTGATAAAATATTCAGTTTTAGTTGCCAGCCAAATAATGAACTACTTTATGAGGCTGCAAAGAATCAAGATAATTCTTTTGAACAAAAGAAGAGGAAAATTGTTCATAGAGAGATTGAAAGGCAAAGGAGACAAGAAATGGCTACCTATTATGCATCTCTCCGATCTTTGCTTCCTCTTGAGTTCATCAAGGGAAAGCGATCAATATCTGATCATATGAACGAGGCAGTGAATTACATAAAACACATGCAAAATAATATCAATGAACTTGGTACCAAGAGAGATGAACTCAAAAAACTCTCCAATTCTAAGCTGGAAAATATTGAGAGCAACCATGCATCATGCAATTTAAATGTTCAACAGAATAATGGTATTTTGAGAATTGAATTTACAAGTGGCTTAAGAGAGGAAAAGCTCAAACTTTCACAGTTGCTAAATTTTTTGGCTAAAGAGGGATTTGAAGTTGATAGCTGCGTTACAACAGAAATCAATGGCAGATTACTCCAAAGTGTCATGTGTGAGGTGAACAATTCCAACATTGTAGATCAATTTGAGCTGAGAAAGAAAATTGTCATGGTAATTCCAACAATGGCATGTGATTGA 720 0.3514 MEHTTFPLHQFSNSPHKQHHKISQDLILDNNYASLLVNNSDKIFSFSCQPNNELLYEAAKNQDNSFEQKKRKIVHREIERQRRQEMATYYASLRSLLPLEFIKGKRSISDHMNEAVNYIKHMQNNINELGTKRDELKKLSNSKLENIESNHASCNLNVQQNNGILRIEFTSGLREEKLKLSQLLNFLAKEGFEVDSCVTTEINGRLLQSVMCEVNNSNIVDQFELRKKIVMVIPTMACD* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1591 239 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 9 237 - -
Mtr6g1591 239 Gene3D - 61 155 IPR036638 GO:0046983
Mtr6g1591 239 SMART finulus 76 128 IPR011598 GO:0046983
Mtr6g1591 239 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 70 122 IPR011598 GO:0046983
Mtr6g1591 239 Pfam Helix-loop-helix DNA-binding domain 71 123 IPR011598 GO:0046983
Mtr6g1591 239 CDD bHLH_AtORG2_like 71 141 - -
Mtr6g1591 239 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 9 237 IPR015660 GO:0003700|GO:0006357
Mtr6g1591 239 Coils Coil 119 139 - -
Mtr6g1591 239 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 69 137 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1591 Mtr-Chr6 28641469 28644926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1591 75 230 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 39.157 5.18e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr6g1591 HLH 3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1591 - - gmx:100780888 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1591 6 28641469 28644926 Mtr6g1591 6 28641469 28644926 ECH
Mtr6g1591 6 28641469 28644926 Mtr1g3829 1 49875117 49876346 PCT