LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr6g1590	ATGCTTCACCGTAAACTCTTTCAATCTCAACCGTCCACTTCATCTTCACCACAACCACCACACCACCACCGTCACCACCACCACATCCTAATCCCTCTCCTCGCCGCAACCACCGTCCTCCTCACCCTCCTCCTCCTCTTCACCTTCCTCCACCGCCGCCGAAAAAAATACACCTCCCCACTCACCTTCACCGACGACCCACCTCACCGTTTCTCCTACTCCCATCTCCGCCGCGCCACAAACTCCTTCTCCACTCCCCTCGGCCACGGCGGCTTCGGCACCGTATTTTCCGGAACACTATCCTCCCAACCCATAGCTGTTAAACTCATGGATACTGACACTGAGATTAGTCCTCAGATTAATCGGTCTTTGGATCGGATACCGAGTTTTTATAAAAACAAACACAAAAAACTTATAGACACTTCATTTCACCAAGGTGAACGTGAATTTCACAACGAACTCTTCTTCGCTTCAAAGCTTCGTTCTCTTTACACAATTCCACCGTTAGGGTTTTCATCTGACCCAAAACGACGTCGTTTTTTACTTGTTTATCCTCTAATGCAAAACGGTAATCTTCAAGACGCGCTTTTGAAGCGAAAGTGTGTTGAGCTTTTGAATTGGAAGAAGAGATTTGAAATTGTGATGGATATTGCTAAGGGACTTTGTTATCTTCATTGTTTTGATCCTCCTGTTATACATGGTGATGTGAAACCTAGTAATGTTTTGTTGGATTGTGATTTTAATGCTAAGATTGGTGATTTCGGATTGGCGAGGTTGAAATCGGAGCCGGTTAGGGTTGAGATTGAGGTTTTGGGTGTTGAGAGTGATGATGAGGTGAAGAAAGGGAATGGGAATGATGAATTGGAGGTTGTGATTGATGATTGTGGGTCGATGGAGAGTGGTCATACCGGTTTTTTTGAAGAGGGTGGTCATTTGGGAACTCCGGTGGCTTCGCCGGAAAGTGTTGAGATGAGAATGAATATGGCGATGGCTATGGCGGCGTCTCCGGGGTTTGATAAGGTTAGTGAGAAGAGTGAGAAGGGGAAAGGGTTGACGAGTAATTCGGTTAGGGATTGGTGGTGGAAACAGGATAATGAGGTTGCGGGTTTGACGCAGGTTGGTGAAGGTAAGAAGGTGAAGGATTATGTGATGGATTGGATTGGAAGGGAAGTGAAAAGTGAGAAGAGTGAATTAGAGGGTGGTAAGATTGGGAATGAGAAGAAAAAGGAGAAGAAGAGGAAGCAGAAATTGGAATGGTGGGAATCGATGGACGAGGAAATTGTTGGTGGGATGATGAGGAAAGAGAAGAGAAAGTCGGTGAGGGAATGGTGGAAGGAGGAGCATTGTGAAGAGGTTGCAAAGGAGAAAAAGAAGAATAAGAAAAAGAAAAAAGGTGTAGAAAATGGTGATGATGGTATTAGCAATGGTGATAATTGGTGGATGAGTGATGATGCATTATACGGGGACAGAAAGAAGGGAAAGAGAAGAAGCGGGAATAATCGCAGTGGTAATATCGATTGGTGGTTAGATGGATTCAGTGGTGACCTATGGAGAGCACGCAGGAATAGTTTTGATTCAGCTAGTGGAGATATTCCAAAGAGTGGTGGTGTGAGTAGTACACCAAGTATGAGAGGAACCGTTTGTTATGTTGCTCCCGAGTATGGCTATGGCGAAGATGTCACTGAAAAGTGTGACGTTTACAGCTTTGGGATCTTGTTGCTTGTTATCATATCTGGGAGACGCCCACTTCAAGTGACCGGTTCACCGATATCAGAGTTTCAAAGGGCTAATCTTCTTTCATGGGCACGCCATTGTGCGAGAAACGGGAAACTCATTGAGCTGGTTGATGATTCTATTCAGTCATTGGATAAGGACCAAGCTCTGATCTGCATCAAGGTGGCTTTGCATTGTTTGCTTAAATCACCTACTCGGCGTCCTTCAATGAAGGAGGTTGTCGGGATGCTTAGTGGCGAACTGGAACCACCTCAGTTGCCTATTGAGTACTCGCCTTCAACGCCTTCTCGCTTCCCTTTCAAATCTAGGAAGAAAGGCCAAGGCCGGTAA	2064	0.4569	MLHRKLFQSQPSTSSSPQPPHHHRHHHHILIPLLAATTVLLTLLLLFTFLHRRRKKYTSPLTFTDDPPHRFSYSHLRRATNSFSTPLGHGGFGTVFSGTLSSQPIAVKLMDTDTEISPQINRSLDRIPSFYKNKHKKLIDTSFHQGEREFHNELFFASKLRSLYTIPPLGFSSDPKRRRFLLVYPLMQNGNLQDALLKRKCVELLNWKKRFEIVMDIAKGLCYLHCFDPPVIHGDVKPSNVLLDCDFNAKIGDFGLARLKSEPVRVEIEVLGVESDDEVKKGNGNDELEVVIDDCGSMESGHTGFFEEGGHLGTPVASPESVEMRMNMAMAMAASPGFDKVSEKSEKGKGLTSNSVRDWWWKQDNEVAGLTQVGEGKKVKDYVMDWIGREVKSEKSELEGGKIGNEKKKEKKRKQKLEWWESMDEEIVGGMMRKEKRKSVREWWKEEHCEEVAKEKKKNKKKKKGVENGDDGISNGDNWWMSDDALYGDRKKGKRRSGNNRSGNIDWWLDGFSGDLWRARRNSFDSASGDIPKSGGVSSTPSMRGTVCYVAPEYGYGEDVTEKCDVYSFGILLLVIISGRRPLQVTGSPISEFQRANLLSWARHCARNGKLIELVDDSIQSLDKDQALICIKVALHCLLKSPTRRPSMKEVVGMLSGELEPPQLPIEYSPSTPSRFPFKSRKKGQGR*	688

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr6g1590	687	ProSiteProfiles	Protein kinase domain profile.	81	664	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr6g1590	687	Coils	Coil	687	687	-	-
	Mtr6g1590	687	MobiDBLite	consensus disorder prediction	660	687	-	-
	Mtr6g1590	687	Gene3D	Transferase(Phosphotransferase) domain 1	521	662	-	-
	Mtr6g1590	687	SUPERFAMILY	Protein kinase-like (PK-like)	61	674	IPR011009	-
	Mtr6g1590	687	PANTHER	OS07G0586332 PROTEIN	1	684	IPR044576	-
	Mtr6g1590	687	Gene3D	Transferase(Phosphotransferase) domain 1	70	274	-	-
	Mtr6g1590	687	PANTHER	PROTEIN KINASE SUPERFAMILY PROTEIN	1	684	-	-
	Mtr6g1590	687	MobiDBLite	consensus disorder prediction	1	18	-	-
	Mtr6g1590	687	MobiDBLite	consensus disorder prediction	451	474	-	-
	Mtr6g1590	687	MobiDBLite	consensus disorder prediction	394	414	-	-
	Mtr6g1590	687	ProSitePatterns	Protein kinases ATP-binding region signature.	87	108	IPR017441	GO:0005524
	Mtr6g1590	687	MobiDBLite	consensus disorder prediction	1	24	-	-
	Mtr6g1590	687	SMART	serkin_6	81	655	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr6g1590	687	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	231	243	IPR008271	GO:0004672\|GO:0006468
	Mtr6g1590	687	Pfam	Protein kinase domain	540	652	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr6g1590	687	Pfam	Protein kinase domain	85	262	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr6g1590	Mtr-Chr6	28634923	28637908	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr6g1590	540	662	Receptor kinase-like Gene Family	AT2G43700	31.452	3.14e-12	67.8

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-XI	Mtr6g1590		Pkinase	1.4e-17	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr6g1590	-		-	lja:Lj2g3v0473820.1	786.949