Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1589 ATGGCAGCTTCAAGTTCAGTTGCCTTAAAATTCTCAATATTGCTGATTATATTACTTGCATTTGAGGCCACAGAGACTATAGCTGTTAGAGTAACAGTTACAATTATCAATCAATTACCGGCACCATTTTTCATATTACGTTGCCAATCTAGAGATAACGATCTTAAAGTTCACAATGTCCAATACGGAGGAAGTTACACATTTTCATTTAAACCATCTGTGATTATTTTTAAAACTACGTTATTCTTCTGCAGCTTTACATGGCCTAGTGACCATCGCCGTCATTATCTTAACGTATATGATGAAGACCGAGACGGCCGCAACAATTGTGATTGGGAAATAAATATAGGTGGAGGTTGTTTGAGCAAGAAGAAAAAGAAGAGATGTTTTCCTTGGAGAAGTATCAAGCCGAACGCATACAACACTTCCAAGATTGCAAGGAGTAATGGGGTAGCCGAATGGAAACCTGCCCACCCACTAGCTTTTTAA 489 0.3845 MAASSSVALKFSILLIILLAFEATETIAVRVTVTIINQLPAPFFILRCQSRDNDLKVHNVQYGGSYTFSFKPSVIIFKTTLFFCSFTWPSDHRRHYLNVYDEDRDGRNNCDWEINIGGGCLSKKKKKRCFPWRSIKPNAYNTSKIARSNGVAEWKPAHPLAF* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1589 162 Pfam Plant self-incompatibility protein S1 32 132 IPR010264 -
Mtr6g1589 162 PANTHER S-PROTEIN HOMOLOG 18-RELATED 7 132 - -
Mtr6g1589 162 PANTHER - 7 132 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1589 Mtr-Chr6 28613332 28613820 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1589 30 134 Carbohydrate Esterase AT3G16970 35.652 1.88e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1589 - - mtr:MTR_0007s0440 338.961