Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1580 ATGTCTAATCAAACTTTGCCACCACCCATCAACGATCCTTACCAATACCTCAAAGTTCAACACAATCCCAACGATACACTCACTCGAAATCTTGAAGATCCACACACCTCACCTTCATTAGACACTTCTCTTTCTGTTCTCACCAAAGATCTCACCATCAACCAATCAAACCAAACATGGCTTCGATTATTTCTACCTAAAAAAGCAACAAATGTTTCAAACCTAAACAACAAGCTACTACCACTTATTGTTTTCTTTCATGGAAGTGGCTTCATTGTACTAAGTGCAGCCTCCACAATGTTCCACAATTTTTGTGCTGAAATGGCGGAAACCGTCGAAGCAGTTGTCGCCTCGGTCGATTATCGCCTCGCACCGGAGCACCGGTTGCCGGCGGCTTATGATGATGCTATGGAAGCATTGAGTTTGATTAGGTCAAGTGATGATGAATGGTTGACTAAATATGTTGACTTTTCAAAATGTTTTCTAATGGGAAATAGTGCTGGAGGTACAATTGCGTATCATGCAGGACTACGTGTAGTTGAAAAGATGAATGATCTTGAGCCGTTGAAAATTCAAGGGTTGATATTGCGTCAACCATTTTTTGGTGGGACCAATAGGACTGAGTCAGAGTTAAGACTTGAGAATGATCCTGTTTTTCCTTTGTGTGTTAGTGATTTGATGTGGGAGTTAGCGTTACCAATTGGTGTTAACCGTGATCATGAGTATTCCAATCTAAGGGTTGGGAATGGTGTTGATGAAAAACTTGCTAAGATTAAGGATCATGAGTGGAGGGTGTTGGTGAGTATGAATGGTGGAGATCCATTGGTTGATCGTAATAAGGAGTTGGTGAAATTGTTGGAGGAAAAGGGTGTGGAAGTGGTGAAGGATTTTCAAGAAGATGGTTTTCATGGAGTTGAGTTTTTTGAGCTATCCAAAGCAAAGAACTTTATTGAGGTGGTGAAAGGTTTCATCTCCTAG 978 0.41 MSNQTLPPPINDPYQYLKVQHNPNDTLTRNLEDPHTSPSLDTSLSVLTKDLTINQSNQTWLRLFLPKKATNVSNLNNKLLPLIVFFHGSGFIVLSAASTMFHNFCAEMAETVEAVVASVDYRLAPEHRLPAAYDDAMEALSLIRSSDDEWLTKYVDFSKCFLMGNSAGGTIAYHAGLRVVEKMNDLEPLKIQGLILRQPFFGGTNRTESELRLENDPVFPLCVSDLMWELALPIGVNRDHEYSNLRVGNGVDEKLAKIKDHEWRVLVSMNGGDPLVDRNKELVKLLEEKGVEVVKDFQEDGFHGVEFFELSKAKNFIEVVKGFIS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1580 325 PANTHER ARYLACETAMIDE DEACETYLASE 5 324 - -
Mtr6g1580 325 Pfam alpha/beta hydrolase fold 83 305 IPR013094 GO:0016787
Mtr6g1580 325 SUPERFAMILY alpha/beta-Hydrolases 8 324 IPR029058 -
Mtr6g1580 325 PANTHER RECEPTOR GID1, PUTATIVE-RELATED 5 324 - -
Mtr6g1580 325 Gene3D alpha/beta hydrolase 14 325 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1580 Mtr-Chr6 28373182 28374414 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1580 34 291 Carbohydrate Esterase AT1G68620 38.868 1.91e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1580 - - gmx:100795069 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1580 6 28373182 28374414 Mtr1g3820 1 49785639 49787024 PCT
Mtr1g3819 1 49783759 49785445 Mtr6g1580 6 28373182 28374414 PCT