Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1572 ATGGGTAAGGAATGGTATGGAGTTAGAAAATCTTCCAAAAGAAGTGTTATAGTTGAAGGAAATGAAACTACACCATCACCACCTAGTGGTTGCATGTGTGCTTTTTTTCAATTCTTTGATTTTCATCCTTTTCACTTTCCTAACACAATAAATCATCAACAAGAAATCACATCTTCTTCTTGCATCTCTAAAGAACACACTCTCGGTGCTGGGTCTCGAACCAACTTTCTTCAGGTTGAAAAGAGAAACTCTCAACCAAGTGACTTCTCGGGAGAGAGGCTCTCAAAAGAACACACTACTACTACTAGTGTGTCAAAAGGTGCTGAAGCTCCTAGGAATAGCTTGAAATCTGAGGATAGCATAGTTTCAGCTTCTCTTTCAAAAGAAGAAAATTTAAAAATTCCAAAGAATATACAAATCAAAACAAAAAGGAGCAATGGTGGAAATTTGACTGATTTGTCCTCAGAAATTAGCACTTCACCAGGAACAAAAACACCAACTTTGGTTGCAAGATTAATGGGTTTGGATCTTCTTCCAAATCCAAACTCACCCTCTTTTTCTTCACCTCTTTCAACACCAAATTCACAAGGGAAGAACAACATTATTCAACATCTTCACCAAGTTAGAACAAAGCAACAACAATTTCAAACCAAAGCAAGAAATAGCATTGATAGTAGTGAAATTACAAGAATGTCCTCATCTAGGAAAACAGAATTTGATCATCATAGACTCTCTCTTCAAATCAACAAAGAGAATAATATTGGTGGTGAGGATTTTGAGCTACCTAGATTTTCATTTTCAAAGAGGAAAATTGATGAGAATAGTTACAAAAGTTCAAATCACTATGCTAAGCAAATTGTGAAACAAGTTAAGGAAAGTGTTGTGAGTAGAAAAGTTGGTCAAGACATTACCAACACTCTCAAAAGCAATCAGGTAATCGGTATTCAACAAAACTCCAACGAACCAGATTATTTACCAAGAAAAGATCAATTACTAACAAGAGAAGAAGTTTTAGGACAATTAAGAATCAAGAGATGTCCTAAAACAACATCATTGAAAGATTCAAATCCTATATCATCATGTTCACCAAGGATTAGATTCATTGAAAACAAACACAAGCCAAACACAACAACAGATCAAAATACAAAACCAAAGGCTTATACATTGAAAGAAGAGCAAGAATCAAGTGACAAGAAATTAGTGTCAAAATGTAAGAAAGATGCCAATGAAAAGTTTAGTTCAAGATTCAAAAGGCTTCCAAAGACATCAGATATAAACATTAGTTCAACATCAAATTCTAGAGCAAACGACATCAGAAGTAATACAAAAAGCAAGAGAATTTCAAATGTCCTCTCTATTGGGACAGAGTCTTCTTATCTGGCTAACAAAATTCCTCTCAAACAGTCACAGGTATCTGAAACTCAAGACTCCAAACTCTGCCCACAGTTATCTAGTTGTTCGAGACAAAGGTACAAACAAGAAGGAACGGTCACACTCTCCAATCAAGAACCAAGCACCAAAGTAATAGAAGACAAATTTAACGGTGCCACAACCCTAGAAACTAACCAACCAGAATTTCAGTACATCACTGAAATCTTAAACAAACATGGCACAATCACAACAACAAAAAATGTGTCTTTTAACAAATGGTTCTCTTCAACACACCTACTTGACCCATCAATCTTCCACCACCTTGAACAAAGTACTAATGATAATATTATCATAAAAAACCAACTTTGTCACCGTTGGAATCGAAAATTGTTGTTTGATTTGGTCGATGAGGTTTTAATCGAGATTTTGAAGCCAAATGGTGGCGAAAAAAGGTTATATTTTTTGGATGGGTTTTGCGACCAGTGGACAATTACAGAGCTAACAGAGAGAGTGTTGAAAAGAGTTGTAGAGTTTCCGTGTGCGAAGTGTGAAGTTTTGGATGACATTGATAATTTGATTGAAGGAGAAGACATGGAGAAATTGATCAAGGTTGAAGATGAAGAAGAAAGAGAAGGATTGGTGATGGAGATTCAAGGGAACATATTAGACACATTGGTGCATGAAACTATTTTGATATTTCAAATTATGGGTACAATTTAG 2091 0.3539 MGKEWYGVRKSSKRSVIVEGNETTPSPPSGCMCAFFQFFDFHPFHFPNTINHQQEITSSSCISKEHTLGAGSRTNFLQVEKRNSQPSDFSGERLSKEHTTTTSVSKGAEAPRNSLKSEDSIVSASLSKEENLKIPKNIQIKTKRSNGGNLTDLSSEISTSPGTKTPTLVARLMGLDLLPNPNSPSFSSPLSTPNSQGKNNIIQHLHQVRTKQQQFQTKARNSIDSSEITRMSSSRKTEFDHHRLSLQINKENNIGGEDFELPRFSFSKRKIDENSYKSSNHYAKQIVKQVKESVVSRKVGQDITNTLKSNQVIGIQQNSNEPDYLPRKDQLLTREEVLGQLRIKRCPKTTSLKDSNPISSCSPRIRFIENKHKPNTTTDQNTKPKAYTLKEEQESSDKKLVSKCKKDANEKFSSRFKRLPKTSDINISSTSNSRANDIRSNTKSKRISNVLSIGTESSYLANKIPLKQSQVSETQDSKLCPQLSSCSRQRYKQEGTVTLSNQEPSTKVIEDKFNGATTLETNQPEFQYITEILNKHGTITTTKNVSFNKWFSSTHLLDPSIFHHLEQSTNDNIIIKNQLCHRWNRKLLFDLVDEVLIEILKPNGGEKRLYFLDGFCDQWTITELTERVLKRVVEFPCAKCEVLDDIDNLIEGEDMEKLIKVEDEEEREGLVMEIQGNILDTLVHETILIFQIMGTI* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1572 696 Pfam Domain of unknown function (DUF4378) 525 685 IPR025486 -
Mtr6g1572 696 MobiDBLite consensus disorder prediction 385 404 - -
Mtr6g1572 696 MobiDBLite consensus disorder prediction 137 165 - -
Mtr6g1572 696 MobiDBLite consensus disorder prediction 367 404 - -
Mtr6g1572 696 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 692 - -
Mtr6g1572 696 MobiDBLite consensus disorder prediction 81 125 - -
Mtr6g1572 696 Pfam DUF761-associated sequence motif 154 182 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1572 Mtr-Chr6 28040278 28044903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1572 137 686 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 29.698 3.71e-38 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1572 - - mtr:MTR_6g089530 1339.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1572 6 28040278 28044903 Mtr6g1572 6 28040278 28044903 ECH
Mtr6g1572 6 28040278 28044903 Mtr1g3810 1 49652903 49655869 PCT