Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1569 ATGACAACTCCAAGTACAATTATATTAAAATGCTCAATACTCCTAACTGTACTACTTGCATTTGAGGCCAGAGAGACTATAGCTTACAGTTTTGGTTATAGGGTAACAGTTTTTATTTACAATAAGGTATTGACTCCAACTCCTACAAACATCACTGTTCGTTGCAAATCTAAAGATGACAATCTTGGAGATCACACACTCATGCCTGGAGAAACCTATGAGTTTTCATTCAAACCATCACATCTTCCATTTAAAAATACGTTATTCTTCTGTGGTTTTACATGGCCTGGAAACCCACATCGACATTATCTTGACATTTACGACCAAGCCCATGACCACTGCAAACAGTGCTCATGGGATATAATCCTAGAAGGAGGCTGTTTCTATGATGGTAAGTGCGTACCTTGGAAAAGTATCGAGTTCATGGAAGCATACAACACTTCAAAGTGGCCAGGCAAGAAGGGATCGCATGAATTGGCTTATGGCCACCCTCTAACCTAA 501 0.3972 MTTPSTIILKCSILLTVLLAFEARETIAYSFGYRVTVFIYNKVLTPTPTNITVRCKSKDDNLGDHTLMPGETYEFSFKPSHLPFKNTLFFCGFTWPGNPHRHYLDIYDQAHDHCKQCSWDIILEGGCFYDGKCVPWKSIEFMEAYNTSKWPGKKGSHELAYGHPLT* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1569 166 Pfam Plant self-incompatibility protein S1 37 136 IPR010264 -
Mtr6g1569 166 PANTHER S-PROTEIN HOMOLOG 18-RELATED 9 136 - -
Mtr6g1569 166 PANTHER - 9 136 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1569 Mtr-Chr6 27936598 27937256 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1569 34 138 Carbohydrate Esterase AT3G16970 38.462 1.14e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1569 - - mtr:MTR_6g016935 173.326