Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1541 ATGAGTTACGACAAATCTAACATTCAAGTTTTGGTTGTGGACCATGATGATGAGTCTTTGGCATCACTCACTAATATACTTATGACATGGCAATACAAAGTTCAAACTGCCAAAGATGCTCACCATGCTTTGGCCACTCTTCGAGACTCTCAAATCTTGTTTGATCTAATAATCAGTGAGTTTCATATATTTGGAATGAATGGATTTGAATTCCAAAAGCAAATTCAAGATGAATTTCAACTCCCTGTCATAGTGATGTCTAAAGACAATAGAGAGGACATAATCTCCATGACTTTAGAACATGGAGCAGCACACTACATGGTTAAACCATTTTGTCCAGAAGACTTTAGAGATATTTGGAAGTATGCAGTGGAAGGAAAGAAAAATAGACTATTTATTGATAGTTTATTTGCGGAAAGTGAAGAAGAAGAAACAAAAAATAAATGTAGTAAAAGAAAGAGTTTTGGTGATCACCAAGATGAAGGAGAGTTTGGAGTTGTTAAGAAACCAAGGCTCGTTTGGACTAATAATCTTCACAGTCGATTTTTGAATGCTATAAGACAGATTGGATTGGGAGATGTTGTGCCAAAGAAAATTTTGGAGATAATGAATGTTCCAAACTTAACAAGAGAAAATGTAGCCAGTCATTTACAGAAGCATCGAATGTTTCTGAAAAGTGTACAAGAGAAAGGAATGGAAGGAGGAGTTTCTCAGAGAGCTTTAAATTCAAAATTTGCATCGGATCTTCCAATTTCTGTCGTCAATGAAATCGCAGAAAGAAGAAAAAACAGACGATATTCAAACCTTTCAGTTTTTCAGGCGAAAAACTCCTTCAATGATGGTGCTTCTACTAGCAATTCATCAAACCCTTCACTTTTTCAAGCGAAAAACTCATTGAAGGATGGTGCGTCTACCAGCAATTCATCAAACCTTTCACTTTTTCAAGCAAATAACTCATTTAATGACGGTACTTCTACCGGCTATCCATCATATGGAGGAAGAAAAGGAACGATGGCTGCTTCGTTTTTGTCATCAAGTTTCTTAACCAGGAACTTAAAATTTGGTGATACTAGTTACCGAAATCAAAGTATAGTTGGAAAAGATTCGTTCAATCATTTCAATTATGGTGGGAAGAACTGGAGCGTTGGATCTACAAGCAAGTCTAACATTTTGCCTAACGTTACTTTTTCTTCAATCAAGATTAGATCAACTGAAGTGGGAACAGGAACTACGAATAAAGGAAAGTTTGATAATGTTATTCCATATAGCTTTGGGTTTAATTTTACGGGTCGAAATGAAAATACGAATTTTAGACCTTGGTTGAATGAAAAGTCCGGTTTGGTTCATGGAGGCTTTGGGTTGGAATTAGTTTCAGAGGCTAATGGAGTAAATGCTTCTGAGGCTGATAAATCAAAGGCTGCTGTTGAAAATGAGGAACACCATAAGAATGCTAATTCCATCAATGAGATGAATGAGAACAATGATGCAAGTCTTCTTCTGAATTCTGACCTCTTTAATTTCTATCAAGATGTGCAACCCCTTGAGAAGTTACATAAAGATGGAGATAATATCGATCCTCAAGCTGGAATTTCATCCTCTGTGTTGAATGAGTCACCAATAAGTTCGAATCAAAACCCTAATCAGGCAAGTATATCAGCTACTGATCAGGCAAGTACATCAGCTAATAATCAGGAATTTGATATGGATCTTATCGGAGAATTGCTTGGAACGTCTATGGAAGATTATTGTTTGGATTGA 1758 0.3623 MSYDKSNIQVLVVDHDDESLASLTNILMTWQYKVQTAKDAHHALATLRDSQILFDLIISEFHIFGMNGFEFQKQIQDEFQLPVIVMSKDNREDIISMTLEHGAAHYMVKPFCPEDFRDIWKYAVEGKKNRLFIDSLFAESEEEETKNKCSKRKSFGDHQDEGEFGVVKKPRLVWTNNLHSRFLNAIRQIGLGDVVPKKILEIMNVPNLTRENVASHLQKHRMFLKSVQEKGMEGGVSQRALNSKFASDLPISVVNEIAERRKNRRYSNLSVFQAKNSFNDGASTSNSSNPSLFQAKNSLKDGASTSNSSNLSLFQANNSFNDGTSTGYPSYGGRKGTMAASFLSSSFLTRNLKFGDTSYRNQSIVGKDSFNHFNYGGKNWSVGSTSKSNILPNVTFSSIKIRSTEVGTGTTNKGKFDNVIPYSFGFNFTGRNENTNFRPWLNEKSGLVHGGFGLELVSEANGVNASEADKSKAAVENEEHHKNANSINEMNENNDASLLLNSDLFNFYQDVQPLEKLHKDGDNIDPQAGISSSVLNESPISSNQNPNQASISATDQASTSANNQEFDMDLIGELLGTSMEDYCLD* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1541 585 MobiDBLite consensus disorder prediction 518 561 - -
Mtr6g1541 585 MobiDBLite consensus disorder prediction 465 490 - -
Mtr6g1541 585 SUPERFAMILY Homeodomain-like 167 226 IPR009057 -
Mtr6g1541 585 MobiDBLite consensus disorder prediction 471 486 - -
Mtr6g1541 585 SMART REC_2 8 120 IPR001789 GO:0000160
Mtr6g1541 585 MobiDBLite consensus disorder prediction 280 299 - -
Mtr6g1541 585 SUPERFAMILY CheY-like 6 127 IPR011006 -
Mtr6g1541 585 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 565 IPR045279 GO:0009736
Mtr6g1541 585 Gene3D - 1 130 - -
Mtr6g1541 585 Pfam Myb-like DNA-binding domain 173 220 IPR001005 -
Mtr6g1541 585 PANTHER RESPONSE REGULATOR 23-RELATED 7 565 - -
Mtr6g1541 585 CDD REC_typeB_ARR-like 10 124 - -
Mtr6g1541 585 MobiDBLite consensus disorder prediction 526 561 - -
Mtr6g1541 585 Gene3D - 166 227 - -
Mtr6g1541 585 Pfam Response regulator receiver domain 10 118 IPR001789 GO:0000160
Mtr6g1541 585 ProSiteProfiles Response regulatory domain profile. 9 124 IPR001789 GO:0000160
Mtr6g1541 585 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 169 222 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1541 Mtr-Chr6 27081476 27086011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1541 8 245 Response Regulator Gene Family AT5G07210 37.063 1.89e-43 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr6g1541 Response_reg 7.8e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1541 - K14491 mtr:MTR_0450s0040 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1541 6 27081476 27086011 Mtr6g1541 6 27081476 27086011 ECH