Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1495 ATGGATTTGATATTAACTTTATCTGAGAGTGGACAACTGAGTGTTGAAACTTCATCAGTGATTCATGATAGTTCTCAATGTTACTCCCCTAGCAATAAAGAATCATGGAAGTCTTTACTCTTTCAATCTATTAAAGAGATTGAAGATTTTTATGGTAATTATGCATATAACACTGGATTTTCTATTAGGACTATGTTGAAGTCGAAGAATAATTCACAAAATAAGAAATCAGATAAGGTACGTTATGTGCGTTATGTTTGTAACAAACAAGGTTTCAAGAAGGGAAGTTTGCTTAATCCTAACAACAGGCCAACATCAGACAGTCCACTGGTTATTGAGTTTGTGAAATTGAAAGAAAAACTTGAGGAAAGGGTTGGTTGTAAAGCTGGAATATCTTTGAAGCTGGATGAAGTTTTGAATGTGTATAAGATTTATAGATGGGATGTGGCTCACTGTCATCCATTACATAAACCAGAGCATTTGTGTTACCTGAGATCATTTCGAGAAGTAAATGAAGTTCAAGGACAACTAGCTCTAATAAATTCTAAAGTTGGAATGTCGATGAGAACGTCTTATGAAGTTATTGGTCAAGGAGTTGGAGGTACGGAGAATCTTCCTTTTCGATTTTCAGACTTAAAGAACTATCTAATGACAATTCGTCAAAAGGAGATGGTGGTTGGTGAAGCAACTTATGATATCCAAGTTGATGCTGCAGAAGACATAGCTAGCATTTTTTGGGCAGATGGAATTATGCAACTGGATTATTCTCTATTTGGTGATGTCATCAGTTTTGATACAACTTACCGAACAATCAATCAATATCGGCCATTAGCTGCCTTTATTGGTTTTGACAATCATCGTAAGAGTGTTTTATTTGGTGCTGCGCTATTGTATGATGAGACATCAGCTACTTTTGATTGGTTGTTTACAACATTCTTGAAGTGTGTTTTTCATGGGCTTTGTTCATGGAACATGGCAGAGAATGCAAAGAAAAATCTTGGCTCCCGTGCAAACAGTGTACTTTTCGATAAGTTAACTAATTTGGTTTCAAATGTAGACGATGAATCAGATTTCGACTATAATTGGGATCAGATGATGAAAAATTGTTTTAATGGAAGGCCTACTTCAGACTTTAGGTGGCTTGTCCAAACTTACGGAAATCGTATGCATTGGTCTTCAGCTTGGGTGAAGTCACATTTTACAGCTGGTCTGAAAACAACTCAGTTAAGTGAGTCTTTCAATGCTTTTCTTCGTGGATTTTTGCAGCCAGACCATTCACTTGTTCGATTCTTTAGTCATTTCAACATTATGGTTCAGAGAATGAGGGATAATCATGCTGAGTTAGACTTCAAGGCTGCAAACACTAGAACAAAAAATAATTATCTCAACAGTCAGTTGATGCGGTCCGTTGTAAACAAGTACAAACCAGCTTGCTTTGCATTTATTCACAGGCAGTATGACCTTTCCTTCAAATACTATTATGAGGAGGACACAACAAAAGGGTCTGCATTGAACAAGTTTTTCAAAGTTTTCACAATTGAAAAGGTTGATGATAATTATGATGATGTTGATAATGATAATGACGGGCCTTCCAATGTCGATGTTTTGGATGCAGAACTTCAAGAAAACCTTTTCCCAAGTTTTGAAGATCATGATCGACTTGATGAAAGGGTTGTCACAGTTGACATTAGAAGCAAAAGTTTTAGTTGTTCATGTCGTATGTTTGAGAACAGGGGCTTCTTATGTCGAAATGTTTTGAAGATCTTGGAGTTCTTAGGTGGTTATGTGCAATATGTTTTAAAGCGTTGGACTAGAGATGTGCGTCCGTCTGTTGATAAGCTGAAATCTAGCATCAATGTTGGCACTGAAGACATCACTCAAGCACAACGATATCAACAAATTTGTGTTGTTACCGTTCAGCATTCTACACGTTTTTGTGCAGATCCGGAGGCATCTGAAATTTTTCTCAACGGTGTTCTTGAAGCTAGGAAAAAGGCAGAGGAGTTGCTTCTTTCTAAAGGTATTCGTCCAGACCCATCTTCCGTGACGCCATCCAAGTCTTCAAAAGTAGCTGCTGTCGATGAACCATCTGCTGGGGTGAAGTCCACTGCACCAAAGTTCAAAGAAAGACCAAATCCAATTAAGTCAAAGAAGCAACTTAAAAGTGATTATGAAAAAGCTAGAGAAAGGCAGAAATTCCTTATAAATCGGAAGAAACAAAAGAAAGATAATGAAGCTTTAAAAAAAAACGGTCACTGA 2259 0.371 MDLILTLSESGQLSVETSSVIHDSSQCYSPSNKESWKSLLFQSIKEIEDFYGNYAYNTGFSIRTMLKSKNNSQNKKSDKVRYVRYVCNKQGFKKGSLLNPNNRPTSDSPLVIEFVKLKEKLEERVGCKAGISLKLDEVLNVYKIYRWDVAHCHPLHKPEHLCYLRSFREVNEVQGQLALINSKVGMSMRTSYEVIGQGVGGTENLPFRFSDLKNYLMTIRQKEMVVGEATYDIQVDAAEDIASIFWADGIMQLDYSLFGDVISFDTTYRTINQYRPLAAFIGFDNHRKSVLFGAALLYDETSATFDWLFTTFLKCVFHGLCSWNMAENAKKNLGSRANSVLFDKLTNLVSNVDDESDFDYNWDQMMKNCFNGRPTSDFRWLVQTYGNRMHWSSAWVKSHFTAGLKTTQLSESFNAFLRGFLQPDHSLVRFFSHFNIMVQRMRDNHAELDFKAANTRTKNNYLNSQLMRSVVNKYKPACFAFIHRQYDLSFKYYYEEDTTKGSALNKFFKVFTIEKVDDNYDDVDNDNDGPSNVDVLDAELQENLFPSFEDHDRLDERVVTVDIRSKSFSCSCRMFENRGFLCRNVLKILEFLGGYVQYVLKRWTRDVRPSVDKLKSSINVGTEDITQAQRYQQICVVTVQHSTRFCADPEASEIFLNGVLEARKKAEELLLSKGIRPDPSSVTPSKSSKVAAVDEPSAGVKSTAPKFKERPNPIKSKKQLKSDYEKARERQKFLINRKKQKKDNEALKKNGH* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1495 752 ProSiteProfiles Zinc finger SWIM-type profile. 559 593 IPR007527 GO:0008270
Mtr6g1495 752 Pfam MULE transposase domain 261 315 IPR018289 -
Mtr6g1495 752 Pfam FAR1 DNA-binding domain 49 156 IPR004330 -
Mtr6g1495 752 Coils Coil 717 744 - -
Mtr6g1495 752 MobiDBLite consensus disorder prediction 708 752 - -
Mtr6g1495 752 PANTHER OS01G0607050 PROTEIN 40 668 - -
Mtr6g1495 752 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 40 668 IPR031052 GO:0006355
Mtr6g1495 752 MobiDBLite consensus disorder prediction 675 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1495 Mtr-Chr6 24849313 24852120 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr6g1495 FAR1 2e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1495 - - mtr:MTR_0558s0020 507.679