Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1480 ATGGCTATGCTTCAATCATCCATCTCTTCCTCCTCTTCCTTCTCCTATGGATTCACCTATCACGTGTTCCTTAGCTTTAGAGGTTGTGACACTCGCTATGGTTTTACTGGAAATCTCTACAGAGCTCTTTGTGACAAGGGAATCCGCACCTTCATCGATGACAGAGAGCTTCAAGGAGGTGACGAAATAACACCATCACTTTTCAAGGCCATTAAAGAGTCTAGGATTTTCATTCCCGTCTTGTCTATCAACTATGCTTCTTCTTCATTTTGCTTGAACGAACTTGTCCACATCATTCACTGCTTCGAGGAATATGGGCGCCTAGTTTTGCCAATTTTCTATGACGTGGAACCTTCTCACGTGCGACATCAAGATGGAAGTTATGGTAAAGCACTTGCCGAGCATATTGAGAGGTTCCAAAATAGCAAGGATAGCATAGAGAGGTTGCAGAAATGGAAGACAGCTCTTACTCAGACTGCTAACTTCTCTGGCCACCATTTCAATACTAGGGTCCTAAAAGTAAATTCACTTCTGGATGTTAGATCTAATGGTGAAGTTCAGATGCTAGGGATCTACGGAATTGGAGGAATGGGAAAGACAACACTTGCTAGAGCAGTTTTTAATTCCATAGCCGATCAATTTGATGATTTGTGTTTTCTTCACGACGTAAGGGAAAATTCAGCTAAATATGGTTTAGAGCATCTGCAGGGAAAACTTCTTTCCAAATTAGTTGAATTGGACATTAAGTTAGTAGATGTCAACGAGGGAATTCCAATCATAAAGCAAAGGCTTCACCGAAAGAAGGTTTTGTTGATTCTCGATGATGTTCACGAGCTGAAGCAATTACAGGTTTTGGCTGGAGGACTTGATTGGTTTGGTCCTGGTAGTAAAGTGATCATTACCACTCGAGACGAACAATTGCTAGCAGGTCATGGGATTGAAAGAGCATATGAAATAGATAAGTTAAATGAGAAAGAAGCTCTTGAATTGTTGAGGTGGAATGCTTTCAAAAATAACAAAGTCAATCCAAATTTCGACAACGTTTTACACCTTGCAGTAACTTATGCTTCAGGCCTTCCATTGGCCTTAGAAGTAGTGGGTTCGAACTTGTTTGGAAAGAATATAGGAGAATGGAAATCTGCATTAAATCAGTATGAAAGGATTCCCATTAAAAAGATCCAAGAGATACTTAAAGTAAGCTTTGATGCTTTGGAGGAAGATGAGAAGAATGTTTTTCTCGACATTTCTTGTTTCTTAGAAGGATGTGATTTAAAAGAAGTTGAAGATATACTTCATGCTCATTATGGTAGCTGCATGAAACATCAAATTAGAGTGTTGCATGAAAAATCTCTCATAAAGATCAAATGGTACCAGGGGAATTATGTTGTGACGTTACATGCCTTGATAGAGAAAATGGGTAAAGAAATTGTCCGCAAAGAGTCTCCAAAAGAGCCTGGAAGACGTAGTAGGTTATGGTTCCATAAAGATATAATTTATGTCTTAGAAGAAAATAAGGGATCAAGTGAAATTGAAATTATATATTTGGAATTCCCGTTATGTGAGAAAGAGGTGGTAGATTGGAAGGGAGATGAACTCAAGAAGATGCAAAACCTCAAAACACTTATTGTTAAGAATGGTAGCTTTTCCAAAGGTCCTAAACATCTTCCTAACAGTTTGAGAGTATTGGAATGGCGTAAATATCCTTCACGGTTCGTACCATCTGATATTTTCCCGAAGAAACTTTCTATATGCAAACTACAGCAAAGTGACTTTACATCATTCGAGTTGCGTGGGACAATCAAGAGGTTTGTGAATATGAGAGAGTTAAATCTAGACAAATGTCAATATTTAACACGGATACATGACATCTCCGATCTCCCAAATTTAGAAATATTTTCATTTAAAAATTGTAAGAATTTAATTGAAATTCACAAATCTGTCGGGTTCCTAAATAAACTTGAAATCTTGAACGCGGAAGGTTGCAGCAAGCTCACGAGTTTCCCACCTCTGAAGTCGACCTCTCTTCAAGAACTGAGGCTTTCATATTGTGAGAGTCTTAAGACTTTTCCAGAAATATTAGGAGAGATGAAGAATATAACACGTATTCGTTTGTTTGACACTTCCATCGAAAAACTGCCTGTTTCATTTCAAAAACTCACGGGGCTTCTTAACTTAATTATAATAGGAAATGGAATGCTTAGATTGCCAAGTAGTATTTTTAGGATGCCAGCTCTGTCAAAAATAAATTTTGAGGATTGTCTACTTCCAAAGAAAAATGATAAATTGAGTTCCATGGTGTTTACAAGCCGAGCAGTAGACATCGAATACATTGAATTGATAAAATGCAACTTATCAGATAAATTTCTTCCAATACTTGTCATGTGGTCTGCTAATGTGAAAACTTTAGACCTATCAGGAAATAATTTCACAATTCTTCCGGAATGCATGAAAGATTGTCGCTTTTTGTGGTTTCTTAAATTGGATGATTGCAAGTGCCTTCGAGAAATTAGAGGGATTCCACCAAATGTAAAACACTTGTCTGCAATACGCTGCAAATCATTGACTTCCTCGTGCAAACACATGCTATTGAATCAGGATATGCATGAGGCTGGACAAACCATGTTTTGTTTGCCGGGATTTGCAAGGATTCCAGAGTGGTTTGAGCACCAAAACATGGGACATACGATTTCTTTTTGGTTTCGTAACAAGCTCCCTTCCACGGCTCTCTTTTTTTCTACTAAATCAGTTGCTACATCCAGGACTAATAATTTTGATATTGATATACCCACTCTAATCATCAACGACAATATAAATGGTTTTCCAGTTCTGATGATTGATTTTGGTCTAATGTCGACTCATCATATATATTTGTGTGATATGAAACTGGGATTTACTCAAATCCACAGCATGGAGAAAATAATTTTAGAAAATGAATGGATCCATGCAGAGGTTACATGTGAACATCCGAAGGTGGAACCACTAACAGAAATTGGAATCCATTTTTTCAAACAGAAAAATAACATGGATGATATTCAATTCACCAATCCTTATGAAAAGATAAAATTAAATGATAATGATGATGATGGTGATGATGTTTTTTATGAAGTTGACGATGTTCTAGATGATGATAATGATGGTGTCTTTTATGATGTTGATGATGAAGACGACCACCATTCACAATAG 3183 0.3723 MAMLQSSISSSSSFSYGFTYHVFLSFRGCDTRYGFTGNLYRALCDKGIRTFIDDRELQGGDEITPSLFKAIKESRIFIPVLSINYASSSFCLNELVHIIHCFEEYGRLVLPIFYDVEPSHVRHQDGSYGKALAEHIERFQNSKDSIERLQKWKTALTQTANFSGHHFNTRVLKVNSLLDVRSNGEVQMLGIYGIGGMGKTTLARAVFNSIADQFDDLCFLHDVRENSAKYGLEHLQGKLLSKLVELDIKLVDVNEGIPIIKQRLHRKKVLLILDDVHELKQLQVLAGGLDWFGPGSKVIITTRDEQLLAGHGIERAYEIDKLNEKEALELLRWNAFKNNKVNPNFDNVLHLAVTYASGLPLALEVVGSNLFGKNIGEWKSALNQYERIPIKKIQEILKVSFDALEEDEKNVFLDISCFLEGCDLKEVEDILHAHYGSCMKHQIRVLHEKSLIKIKWYQGNYVVTLHALIEKMGKEIVRKESPKEPGRRSRLWFHKDIIYVLEENKGSSEIEIIYLEFPLCEKEVVDWKGDELKKMQNLKTLIVKNGSFSKGPKHLPNSLRVLEWRKYPSRFVPSDIFPKKLSICKLQQSDFTSFELRGTIKRFVNMRELNLDKCQYLTRIHDISDLPNLEIFSFKNCKNLIEIHKSVGFLNKLEILNAEGCSKLTSFPPLKSTSLQELRLSYCESLKTFPEILGEMKNITRIRLFDTSIEKLPVSFQKLTGLLNLIIIGNGMLRLPSSIFRMPALSKINFEDCLLPKKNDKLSSMVFTSRAVDIEYIELIKCNLSDKFLPILVMWSANVKTLDLSGNNFTILPECMKDCRFLWFLKLDDCKCLREIRGIPPNVKHLSAIRCKSLTSSCKHMLLNQDMHEAGQTMFCLPGFARIPEWFEHQNMGHTISFWFRNKLPSTALFFSTKSVATSRTNNFDIDIPTLIINDNINGFPVLMIDFGLMSTHHIYLCDMKLGFTQIHSMEKIILENEWIHAEVTCEHPKVEPLTEIGIHFFKQKNNMDDIQFTNPYEKIKLNDNDDDGDDVFYEVDDVLDDDNDGVFYDVDDEDDHHSQ* 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1480 1060 CDD AAA 191 308 - -
Mtr6g1480 1060 Gene3D - 156 314 IPR027417 -
Mtr6g1480 1060 PRINTS Disease resistance protein signature 188 203 - -
Mtr6g1480 1060 PRINTS Disease resistance protein signature 263 277 - -
Mtr6g1480 1060 PRINTS Disease resistance protein signature 356 370 - -
Mtr6g1480 1060 PRINTS Disease resistance protein signature 648 664 - -
Mtr6g1480 1060 Pfam NB-ARC domain 176 401 IPR002182 GO:0043531
Mtr6g1480 1060 Pfam TIR domain 20 163 IPR000157 GO:0007165
Mtr6g1480 1060 SMART till_3 19 162 IPR000157 GO:0007165
Mtr6g1480 1060 PANTHER ARCHAEAL ATPASE 30 986 - -
Mtr6g1480 1060 Gene3D - 2 155 IPR035897 -
Mtr6g1480 1060 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 164 IPR035897 -
Mtr6g1480 1060 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 986 IPR044974 GO:0006952
Mtr6g1480 1060 Gene3D - 321 405 IPR042197 -
Mtr6g1480 1060 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 415 IPR027417 -
Mtr6g1480 1060 SUPERFAMILY "Winged helix" DNA-binding domain 391 502 IPR036390 -
Mtr6g1480 1060 Gene3D Ribonuclease Inhibitor 685 868 IPR032675 -
Mtr6g1480 1060 Gene3D Ribonuclease Inhibitor 501 684 IPR032675 -
Mtr6g1480 1060 ProSiteProfiles TIR domain profile. 18 182 IPR000157 GO:0007165
Mtr6g1480 1060 SUPERFAMILY L domain-like 523 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1480 Mtr-Chr6 24697301 24701419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1480 14 754 WRKY Transcription Factor Family AT4G12020 27.729 3.77e-65 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1480 - - mtr:MTR_6g075690 1467.21