Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1452 ATGAAAAATGGAAGCTTAGAACAGTGGTTACATCCTGAGACTTTGAATGCAAATCCTCCAATAACATTGAACCTTGGTCATAGATTAAACATCATCATCGATGTTGCTTCTGCATTACATTATCTTCATCGAGAATGTGAGCTATTAGTACTTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGATGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCAACCATTTCTGGTACGTCTAATAAGAATACTAGCACAATCGGAATAAAAGGAACAGCTGGTTATGCTCCACCGGAGTATGGGATGGGTTTAGAAGTTTCCACATGTGGTGACATGTATAGCTTTGGAATCCTTATGCTGGAAATGCTTACTGGTAGAAGACCCACTGATGAACTTTTTGAAGATGGTCAAAATCTGCATAACTTTGTTACAATTTCATTTCCCAATAATCTTGTAAAGATTTTTGATCCACATCTTTTACCAAGATCTGAAGATGGAAATCATGAGATTCTTATTCCAACAGTAGAGGAGTGCTTAGTTTCCCTTTTTAGGATTGGACTTTTATGTTCATTGGAATCACCAAAAGAAAAGAAGGAATGA 618 0.3706 MKNGSLEQWLHPETLNANPPITLNLGHRLNIIIDVASALHYLHRECELLVLHCDLKPSNVLLDDDMVAHVSDFGIARLVSTISGTSNKNTSTIGIKGTAGYAPPEYGMGLEVSTCGDMYSFGILMLEMLTGRRPTDELFEDGQNLHNFVTISFPNNLVKIFDPHLLPRSEDGNHEILIPTVEECLVSLFRIGLLCSLESPKEKKE* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1452 205 SUPERFAMILY Protein kinase-like (PK-like) 1 165 IPR011009 -
Mtr6g1452 205 SMART serkin_6 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1452 205 ProSitePatterns Serine/Threonine protein kinases active-site signature. 50 62 IPR008271 GO:0004672|GO:0006468
Mtr6g1452 205 Gene3D Transferase(Phosphotransferase) domain 1 1 204 - -
Mtr6g1452 205 Pfam Protein kinase domain 2 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1452 205 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 203 - -
Mtr6g1452 205 ProSiteProfiles Protein kinase domain profile. 1 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1452 205 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 1 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1452 Mtr-Chr6 23601057 23601767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1452 1 203 Receptor kinase-like Gene Family AT3G47580 48.058 3.80e-55 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr6g1452 Pkinase 4.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1452 - - mtr:MTR_5g025930 338.191