Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1448 ATGGCTGAACAAATTCCATACGGTGTTGCTACAAGTCTCGTTAACAGGTTGGCTTCTGCAGCCTTTCGTGAAATTGGACGAATTTATGGTGTCATGGATGAACTGGAAAGGCTTAAGAAGACAGTTGAATCCATCAAAGCTGTGCTCCTTGATGCTGAAGACAAACAAGAGCAAAGTCATGCTGTACAACTCTGGGTTAGAAGGCTCAACGACCTGCTTCTTCCTGCAGATGATTTGATAGATGAATTTTTTATTGAAGATATGATACACAAAAGGGATAAAGCTCATAAGAACAAAGTGAAACAGGTATTTCATTCCTTCTCACCAAGCAGAACTGCTTTTCGCCGTAAAATGGCTCATGAGATTGAAAAAATACAAAGAAGTTTTAAAGATGTTGAGAAAGATATGTCTTATTTGAAACTTAACTCCAATGTTGTGGTGGTTGCGAAAACTAACAATGTAAGGAGGGAAACTTGCTCTTATGTGTTAGAATCTGAGATCATTGGAAGAGAAGATGATAAAAACAAGATTATAAGCTTGTTGAGGCAATCACATGAACATCAGAATGTCTCATTGGTTGCTATTGTTGGTATTGGTGGTTTGGGAAAGACAGCTCTTGCTCAACTGGTATACAAAGATGGTGAAGTGAAAAATTTGTTTGAAAAGCATATGTGGGTATGTGTCTCAGATAACTTTGATTTCAAAACTATTCTGAAGAACATGGTTGCGTTATTAACCAAAGAGGACGTTGTAAATAAGACATTAGAAGAGTTGCAAAGTATGCTTCAAGTCAATTTAACTGGTAAGAGATACTTGTTAGTTCTCGACGACGTTTGGAATGAGAGTTTTGAAAAGTGGGATCAATTGAGGCCTTATTTGATGTGTGGTGCTCAAGGCAGTAAGGTTGTAATGACAACACGCAGTAAGATTGTGGCAGATACAATGAGTGTAAGTGACCAACATGTTTTGAGAGGTTTAACTCCAGAAGAATCATGGGTTTTGTTCAAGAATATTACCTTTGGGGATGTTACTGTTGGAGTGAACCAACCTCTTGAATCAATTGGTAAGAAGATAGTAGAAAAGTGCAAAGGAGTTCCGTTAGCAATTAGATCACTAGGAGGCATATTACGAGGTGAAAGTAAAGAAAGTGAATGGATCAATGTCTTACAAGGAGAATTTTGGAAATTGTGTGATCGTGAAAATAGCATCATGCCGGTCCTAAAATTGAGTTACCAGAACTTATCACCTCAACAAAGGCAATGTTTTGCTTATTGCTCTTTATTTCCTCAGGATTGGGAATTTGAGAAGGATGAGTTAATTCAAATGTGGATGGCACAAGGTTATCTTGGTTGTTCAGTTGAAAAGCAATGCATGAAAGATGTTGGTAATCAATTTGTAAAAATTTTCTTGAAGAATTCATTCTTCCAAGATGCAGATTTGAATGTTCATGGTGATGTAACTGGTTTTAAAATGCATGATTTAATGCATGATCTTGCAACACAAGTAGCTGGCAATGATTGTTGTTACTTGGATTCAAGTAAGGCAAAAAAATGTTTAGGAAGACCCGTGCATGTATTAGTGGAATATGATGCCTTGTGTTTGTTGGAATCCCTGGATTCAAGTAGGTTGCGGACTTTGATTGTGATGAGTTACAATGACTATAAATTCCGTCGACCAGAAATATCGGTTTTTCGAAATTTGAAATACTTGCGCTTTTTGAAAATGGAATCTTGTAGTCGCCAGGGAGTTGGTTTCATTGAAAAATTGAAGCATTTAAGGCATCTTGACTTGCGCAACTATGATTCAGGAGAAAGTCTTTCCAAATCTATCGGCAATCTTGTTTGTTTACAGACCATAAAATTGAATGATTCTGTGGTAGATTCTCCAGAAGTTGTTTCAAAATTAATTAATTTGAGACACCTTACGATAAATCATGTGACCTTCAAAGACAAGACACCGTCTGGATTTAGAAAATTGAGCATACAACAACCCAAGGGTCTGTCTTTGTCCAATTGGCTCTCTCCAGTCACAAATATAATTGAATTATGTCTTTATAACTGCCAAGATTTACGATATCTCCCACCATTGGAACGCCTTCCATTCCTTAAGTCACTTGATTTAAGATGGCTTAATCAATTGGAGTACATATATTACGAGGAGCCTATTCTTCATGAATCATTCTTCCCATCTTTGGAGATCCTAAACTTTTTTGAATGTTGGAAGCTGAAGGGATGGAGGAGGATGGGAGATGATTTGAATGATATTAACTCTTCGCATCATCTCTTCTTGCCTCACTTTCCTTGTCTTTCTAAATTGGTAATTGTTAGGTGCAAAATGTTGACTTTCATGCCTACTTTTCCAAACATTAAGAAGAAATTAGAATTGTGGAGTTGCAGTGCAGAGATATTGGAAGCAACACTAAATATAGCAGAGTCACAATATTCAATTGGCTTCCCTCCTCTTTCCATACTCAAATCCTTCCATATTATTGAAACCATTATGGGTATGGAAAATGTCCCAAAGGATTGGTTGAAAAATCTTACTTCTCTCGAGAATCTTGACTTAGACTCTTTGTCAAGTCAACAATTTGAAGTAATTGAAATGTGGTTTAAAGATGACCTCATTTGTCTTCCTTCCCTCCAAAAAATCCAAATTAGAACTTGTCGTTTAAAGGCATTACCAGATTGGATATGCAACATCTCATCACTTCAGCATCTTGCGGTGTACGGGTGCGAAAGTTTGGTAGATCTGCCTGAAGGAATGCCACGTCTTACAAACTTACACACCTTAGAAATCATTGGCTGTCCAATCTCATATTATTATGATGAATTCCTGAGAAAAACAGGTGCAACTTGGTCTAAAATTGCTCACATCCCAAAAATCATCACACGTTGA 2895 0.371 MAEQIPYGVATSLVNRLASAAFREIGRIYGVMDELERLKKTVESIKAVLLDAEDKQEQSHAVQLWVRRLNDLLLPADDLIDEFFIEDMIHKRDKAHKNKVKQVFHSFSPSRTAFRRKMAHEIEKIQRSFKDVEKDMSYLKLNSNVVVVAKTNNVRRETCSYVLESEIIGREDDKNKIISLLRQSHEHQNVSLVAIVGIGGLGKTALAQLVYKDGEVKNLFEKHMWVCVSDNFDFKTILKNMVALLTKEDVVNKTLEELQSMLQVNLTGKRYLLVLDDVWNESFEKWDQLRPYLMCGAQGSKVVMTTRSKIVADTMSVSDQHVLRGLTPEESWVLFKNITFGDVTVGVNQPLESIGKKIVEKCKGVPLAIRSLGGILRGESKESEWINVLQGEFWKLCDRENSIMPVLKLSYQNLSPQQRQCFAYCSLFPQDWEFEKDELIQMWMAQGYLGCSVEKQCMKDVGNQFVKIFLKNSFFQDADLNVHGDVTGFKMHDLMHDLATQVAGNDCCYLDSSKAKKCLGRPVHVLVEYDALCLLESLDSSRLRTLIVMSYNDYKFRRPEISVFRNLKYLRFLKMESCSRQGVGFIEKLKHLRHLDLRNYDSGESLSKSIGNLVCLQTIKLNDSVVDSPEVVSKLINLRHLTINHVTFKDKTPSGFRKLSIQQPKGLSLSNWLSPVTNIIELCLYNCQDLRYLPPLERLPFLKSLDLRWLNQLEYIYYEEPILHESFFPSLEILNFFECWKLKGWRRMGDDLNDINSSHHLFLPHFPCLSKLVIVRCKMLTFMPTFPNIKKKLELWSCSAEILEATLNIAESQYSIGFPPLSILKSFHIIETIMGMENVPKDWLKNLTSLENLDLDSLSSQQFEVIEMWFKDDLICLPSLQKIQIRTCRLKALPDWICNISSLQHLAVYGCESLVDLPEGMPRLTNLHTLEIIGCPISYYYDEFLRKTGATWSKIAHIPKIITR* 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1448 964 PANTHER DISEASE RESISTANCE PROTEIN RP 656 819 IPR044974 GO:0006952
Mtr6g1448 964 PANTHER DISEASE RESISTANCE PROTEIN RP 35 668 IPR044974 GO:0006952
Mtr6g1448 964 PRINTS Disease resistance protein signature 192 207 - -
Mtr6g1448 964 PRINTS Disease resistance protein signature 265 279 - -
Mtr6g1448 964 PRINTS Disease resistance protein signature 362 376 - -
Mtr6g1448 964 PRINTS Disease resistance protein signature 845 861 - -
Mtr6g1448 964 SUPERFAMILY L domain-like 475 804 - -
Mtr6g1448 964 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 425 IPR027417 -
Mtr6g1448 964 SUPERFAMILY RNI-like 728 946 - -
Mtr6g1448 964 Gene3D - 151 322 IPR027417 -
Mtr6g1448 964 Coils Coil 115 135 - -
Mtr6g1448 964 PANTHER OS05G0414200 PROTEIN 35 668 - -
Mtr6g1448 964 PANTHER OS05G0414200 PROTEIN 656 819 - -
Mtr6g1448 964 Coils Coil 35 55 - -
Mtr6g1448 964 CDD RX-CC_like 7 126 IPR038005 -
Mtr6g1448 964 Gene3D - 325 410 IPR042197 -
Mtr6g1448 964 Gene3D - 411 502 IPR036388 -
Mtr6g1448 964 Pfam NB-ARC domain 170 413 IPR002182 GO:0043531
Mtr6g1448 964 Gene3D - 10 123 - -
Mtr6g1448 964 Gene3D Ribonuclease Inhibitor 530 813 IPR032675 -
Mtr6g1448 964 Gene3D Ribonuclease Inhibitor 814 947 IPR032675 -
Mtr6g1448 964 Pfam Rx N-terminal domain 11 96 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1448 Mtr-Chr6 23378213 23385162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1448 189 502 WRKY Transcription Factor Family AT5G45050 24.540 1.50e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1448 - - mtr:MTR_8g027540 1238.79