Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1447 ATGGAAACCGCTACAACCCTCACCGGATTACTCCAATCCGTCGCTGAAAAATTCCCCTCCCGTCGTGCCATCTCCGTCGCCGGAAAATTCGACCTCACCCATTCCCAACTCCATGAATTAGTCGAATCTGCAGCTAATCATCTCATCTCCGCTGGAATCAAACCCAACGATGTCGTCGCTCTCACCTTCCCCAACACCATCGAGTATGTTATCATGTTCCTTGCCGTGATTCGAGTTCGAGCCACGGCAGCACCATTAAACGCAGCATACACATCAGAAGAATTCGAGTTTTATCTTTCAGACTCAGAATCAAAGCTTCTCTTAACACCATTAGAAGGCAACAATCCTGCTCAAACCGCAGCTACAAAGCTCAACATTCCACTCGGTTCGGTTTGCTTCAATAAAACCGAAGAAGAAACAAAACTTTCAATTTCGCTGAACCAAACTGAGTCAGCGAACTCGGTTTCGGAACTAATTAACGAACCATCCGACGTGGCACTTTTTCTTCACACATCAGGTACCACAAGTCGGCCTAAGGGGGTCCCACTGAGTCAACACAATTTAGTTTCATCGGTTCGAAACATTGAATCGGTTTACCGGCTCAGTGAGTTGGATTCGACGGTGATTGTTCTTCCGCTTTTTCATGTTCATGGGTTGATTGCTGGGTTGCTGAGTTCACTCGGTGCCGGAGGTGCGGTGGCGTTGCCGGCGGCGGGGAGATTCTCTGCGTCGACATTTTGGAAGGATATGATTCAATATAATGCCACGTGGTACACGGCGGTTCCTACCATACACCAGATTATATTGGACCGTCATCAAAGTAACCCTGAACCGGTTTACCCGAAACTCCGGTTTATTCGTAGCTGTAGTGCTTCGTTGGCTCCGGTTATTCTAGGTCGTTTGGAGGAAGCGTTTGGGGCACCCGTTTTAGAAGCTTATGCTATGACGGAGGCTACTCATTTGATGTGTTCAAATCCTTTGCCAGAAGATGGGCCTCACAAAGCTGGGTCGGTCGGAAAACCTGTGGGTCAAGAAATGGCTATTTTAGATGAATCGGGTCGGGTTTTGGAGGCCGATGTTAATGGTGAGGTTTGTATTAAGGGAGAAAATGTCACAAAAGGGTATAAGAACAATGAAGAAGCTAATAAATCAGCATTTTTGTTTGGTTGGTTTCATACCGGTGATATTGGTTACTTTGATTCTGATGGGTATTTGCATCTTGTGGGTCGGATTAAGGAACTCATCAACAGAGGAGGAGAGAAAATATCACCAATTGAAGTCGATGCTGTCCTTCTTGGACATCAAGACGTAGCTCAGGCAGTTGCTTTCGGAGTGCCAGATCAGAAATACGGTGAAGAGATACATTGTGCAATCATTCCAAGAGAAGGATCAAACATTGATGCTGAAGAGGTGCTAAAATATTGCAAGACGAATCTCACATCTTTTAAAGTTCCCAAAAAGGTTTTCATTACTGATTCTTTGCCCAAGACAGCCACTGGCAAGATTTTACGTCGTCTTGTGGCAGAACACTTTGTCTCTCAAGCTTGA 1548 0.4574 METATTLTGLLQSVAEKFPSRRAISVAGKFDLTHSQLHELVESAANHLISAGIKPNDVVALTFPNTIEYVIMFLAVIRVRATAAPLNAAYTSEEFEFYLSDSESKLLLTPLEGNNPAQTAATKLNIPLGSVCFNKTEEETKLSISLNQTESANSVSELINEPSDVALFLHTSGTTSRPKGVPLSQHNLVSSVRNIESVYRLSELDSTVIVLPLFHVHGLIAGLLSSLGAGGAVALPAAGRFSASTFWKDMIQYNATWYTAVPTIHQIILDRHQSNPEPVYPKLRFIRSCSASLAPVILGRLEEAFGAPVLEAYAMTEATHLMCSNPLPEDGPHKAGSVGKPVGQEMAILDESGRVLEADVNGEVCIKGENVTKGYKNNEEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLGHQDVAQAVAFGVPDQKYGEEIHCAIIPREGSNIDAEEVLKYCKTNLTSFKVPKKVFITDSLPKTATGKILRRLVAEHFVSQA* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1447 515 Pfam AMP-binding enzyme 12 417 IPR000873 -
Mtr6g1447 515 Pfam AMP-binding enzyme C-terminal domain 426 501 IPR025110 -
Mtr6g1447 515 Gene3D - 411 513 IPR045851 -
Mtr6g1447 515 SUPERFAMILY Acetyl-CoA synthetase-like 5 513 - -
Mtr6g1447 515 Gene3D - 5 410 IPR042099 -
Mtr6g1447 515 ProSitePatterns Putative AMP-binding domain signature. 168 179 IPR020845 -
Mtr6g1447 515 PANTHER ACYL-COA SYNTHETASE 1 514 - -
Mtr6g1447 515 CDD FACL_fum10p_like 19 509 IPR045310 GO:0016874
Mtr6g1447 515 PANTHER OXALATE--COA LIGASE-LIKE 1 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1447 Mtr-Chr6 23324410 23332434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1447 5 514 Monolignol Biosynthesis Gene Families AT4G05160 29.490 7.07e-54 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1447 K22133 - gmx:100779306 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1447 6 23324410 23332434 Mtr6g1447 6 23324410 23332434 ECH