Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1420 ATGAAATCGTTGTCGAGATTCACCGCCGTATTGGTGTTGCCGGTGGTGTTAATCGTCGGCGCGTTGGTGTACGCGCGGTTTCTCGAAACACCTGAGGTTTTCTCCGTAGTTTCATCTAACGAACCAATCCTAACAAACAAAGCATACGATGAAACACCAAAAAAGCCCCTGAATCAAATAGATGAAACACCAAAAAAAACCCTGAATCAAATAGAGATCCCATTAAACTGCAGTGGACACAACCTCACTGGAACATGTCCCACAAACAATAACCAAATCTTAACAAACAATCAAGACCATTCATCTACTTCCACGTGTCCCGATTACTTCCGTTGGATCCATGAAGATTTAAGGCCATGGGCCCACACAGGAGTAACAAAGGAAGCAATAGAGAAAGCACAAAAAACAGCAAATTTCAAGTTAGTGATACTAAAAGGAAAAGCTTATTTAGAGACATATGAGAAAGCATTTCAAACAAGAGATACTTTTACTCTATGGGGGATCCTACAGTTGTTAAGGAAGTACCCTGGAAAATTGCCTGATTTGGAGCTTATGTTTGATTGTGTTGATTGGCCAGTTGTTCCAAGTGATGAATATAGTGGACCTAATGGTGTTGATCCACCACCACTCTTTCGTTATTGTGGTAATGATGCAACATTGGATATAGTTTTTCCTGATTGGTCCTTCTGGGGATGGCCTGAAACCAACGTAAAGCCATGGGAAATTTTGTTGGGAGAACTGAATGAGGGCAACAAAAGGATTCCATGGATGAAGAGAGAACCTTATGCTTATTGGAAAGGGAATCCAAGTGTTGCTGAAACAAGACAAGACCTCATGAAATGCAATGTTTCTGAAAAACAAGAATGGAATGCTCGTTTATATGATCAGGATTGGGGACGAGAGGCACAACAAGGGTACAAGAAATCTGACTTGGCAGGTCAATGCACCCATAGATACAAGGTTTACATTGAAGGTTCTGCTTGGTCCGTGAGTGAAAAATACATCCTAGCATGTGATTCTCCCACTTTACTTGTGAAACCTCATTACTATGATTTCTTCACAAGAGGGTTAATTCCAGTGCATCATTATTGGCCTATTAAGGAAGATGATAAGTGCAAGTCCATTAAGTTTGCTGTGGATTGGGGCAATAGTCACAAGACAAAGGCACATGATATTGGAAAAGCAGCAAGTAATTTCATTCAAGAAGAGTTGAAGATGGATTATGTGTATGACTATATGTTTCATCTCCTAAATTCATATGCTAAACTCTTTAGGTACAAACCATCTATAAGTGATAAAGCTGTTGAACTATGTGTGGAATCAATGGTTTGTAAAGCAGAAGGTAATGAAAAGAAATTTATGATGGAATCATTGGTCAAGGGTCCTTCAAACACAAATCCATGCACCATGCCTCCTCCTTATGATCCTCCATCTTTGCATGCACAAATAAGAAGAAAGCAAGGTTCAATTCAACGAGTCGAATTCTGGGAGACAAGTTATTGGAAGAAACAAAATACGAAATCTTAA 1527 0.3962 MKSLSRFTAVLVLPVVLIVGALVYARFLETPEVFSVVSSNEPILTNKAYDETPKKPLNQIDETPKKTLNQIEIPLNCSGHNLTGTCPTNNNQILTNNQDHSSTSTCPDYFRWIHEDLRPWAHTGVTKEAIEKAQKTANFKLVILKGKAYLETYEKAFQTRDTFTLWGILQLLRKYPGKLPDLELMFDCVDWPVVPSDEYSGPNGVDPPPLFRYCGNDATLDIVFPDWSFWGWPETNVKPWEILLGELNEGNKRIPWMKREPYAYWKGNPSVAETRQDLMKCNVSEKQEWNARLYDQDWGREAQQGYKKSDLAGQCTHRYKVYIEGSAWSVSEKYILACDSPTLLVKPHYYDFFTRGLIPVHHYWPIKEDDKCKSIKFAVDWGNSHKTKAHDIGKAASNFIQEELKMDYVYDYMFHLLNSYAKLFRYKPSISDKAVELCVESMVCKAEGNEKKFMMESLVKGPSNTNPCTMPPPYDPPSLHAQIRRKQGSIQRVEFWETSYWKKQNTKS* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1420 508 Pfam Glycosyl transferase family 90 102 497 IPR006598 -
Mtr6g1420 508 PANTHER MOTIF-CONTAINING PROTEIN 1, PUTATIVE-RELATED 65 506 - -
Mtr6g1420 508 SMART cap10 178 427 IPR006598 -
Mtr6g1420 508 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 65 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1420 Mtr-Chr6 22613531 22622090 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1420 - - gmx:100800365 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1963 7 35711755 35722382 Mtr6g1420 6 22613531 22622090 ECH
Mtr6g1420 6 22613531 22622090 Mtr6g1420 6 22613531 22622090 ECH