Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1415 ATGGCTTGCAGAGGCAACAACAACAAAGAAGAAGAAGTGTTTCGTTGCATGAAGAGAGAACGCCCCAACGCCGTCGCCGCGGATGAGGAAGAAGAGGAGCATCAGGACTCCAACATTCGCAGAATCATCCGCTCCGAGTTCTTCAAACTCAAGTCTCTTATCAATGAGAAAAAAGATGATTTAATGAACACTGCTTCGGACAAGTTCGATTCAATCCTTCATGACTTCGACAAGTTAGACGAGCAAGTGAAGAAGCCACAAGAGCAGATTGTTGACGCTGAAGCACTTCTAGATCTGACACGCACTCTGGTTGGATCGGTTAACTCTATGGTGAACGAAGGGGTTACTCCTTCTCAGTTTGTGTCATCTCTCCTCAAACATTATGCTCACCCACCCAACACTTCCATTGACTGGCAAAAGCTTGGCATTTTCGTTTCACCCATTTTCCTCACTGTTCATGGCTCTTCAACCATGCTTGATCCCATGGAAAGTCAGTTGAAACGACGTAAGGCCATTGTGTTGTAA 525 0.4571 MACRGNNNKEEEVFRCMKRERPNAVAADEEEEEHQDSNIRRIIRSEFFKLKSLINEKKDDLMNTASDKFDSILHDFDKLDEQVKKPQEQIVDAEALLDLTRTLVGSVNSMVNEGVTPSQFVSSLLKHYAHPPNTSIDWQKLGIFVSPIFLTVHGSSTMLDPMESQLKRRKAIVL* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1415 174 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 20 172 - -
Mtr6g1415 174 PANTHER UNCHARACTERIZED 20 172 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1415 Mtr-Chr6 22460880 22461557 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1415 40 170 Non-SMC Element family AT1G51130 43.571 4.49e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1415 K22825 - mtr:MTR_0042s0070 347.051