Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1413 ATGGCCCAATCTCTGTTATTCAAAGTCAAGAGGAGTGAACCTGAATTGATAAGTCCATCAAAACCCACTCCTCATGAAATAAAACGACTCTCAGACATAGATGACCAACAATCTTTACGCTTTCATGTTCCTTTGATACAATTTTACAACTATAATCCAATTATGGAAGGCAAAGACCCTGTTGTTGTTATTAGAAAAGCCCTTGCGAAAACGCTTGTGTTTTATTATCCATTGGCAGGTAGGTTGAGGGAAGGTCCCGGCAGGAAACTTATGGTTGATTGTACTGGAGAAGGTGTTTTGTTTATTGAAGCTGATGCTGATGTTACTCTTAAACAATTTGGTGATGCACTTCATCCTCCATTTCCATGCTTGGGTGAGCTTATCTATGATGTTCCTGGTTCTTCAGATGTTCTTAACACTCCATTGCTGCTTATTCAGGTAACACGCCTCAAATGTAGAGGTTTCATTTTTGCTCTTCGTTTCAACCATACAATGACTGATGGATCAGGTATAGTTCAATTCATGAGTGCTTTAGCAGAAATATCTCAGGGTATGAGAAAACCTTCAATCTCACCAGTGTGGTGCAGAGAAATTCTAAGCGCAAGGGATGCACCAAGAGTGACGTGTACTCATCGTGAATACGAACCAGAACCTGACAACAAAGCAAACACATTTTCCTTAGATGACATGGTCCACCATGCTTTCTTCTTTGGTGCAACCGAGGTAGCCGCAATTCGTTCTCTACTTCCACCTCAACAACAACAAAAATACTCCAATTTTGAAATCATCACATCATATTTTTGGCGTTGTCGTACACTAGCGTTACAACTAGATACTAACGAAGAAGTTCGCATAATCTGCATCGTCGATGCACGTAGCAAATTTGTTAACCTACTTGTACCAAATGGTTACTATGGTAACGCTATAGCGCTTCCCGCTGCAATTACAACTGTAGGAAAACTAATTGAAAACCCATTGACGTATGCACTGGATTTAGTTAAGAAAGCAAAAGCTAATGTCACCGAAGAGTACATGCATTCCATGGCAGATTTATTGGTAATCAAGGGTAGACCTCATTTTACTACAGCGAATGCTTGTTTAGTGTCTGATGTTACACGTGCTGGATTTAGAGATGTTGATTTTGGTTGGGGGAAAGCTGTTTATGGAGGATTAGCTAGAGCAGGAGATGGTACTAATCCTGGTATTTCTACCATTTATATACCTTTTAAAAATGCTAAAGGAGAGGAAGGTTTTGTTATACCAGTTTTTTTTCCAACTCAAGTCATCGAGAGGTTGGTTAAAGAGTTGGATAAAGTTCTTAAGAACAACATTAACTCGCCTACTATGGGTGATAGAAAATCTGGAATCATTAATTCTTCGTTGTAG 1386 0.3939 MAQSLLFKVKRSEPELISPSKPTPHEIKRLSDIDDQQSLRFHVPLIQFYNYNPIMEGKDPVVVIRKALAKTLVFYYPLAGRLREGPGRKLMVDCTGEGVLFIEADADVTLKQFGDALHPPFPCLGELIYDVPGSSDVLNTPLLLIQVTRLKCRGFIFALRFNHTMTDGSGIVQFMSALAEISQGMRKPSISPVWCREILSARDAPRVTCTHREYEPEPDNKANTFSLDDMVHHAFFFGATEVAAIRSLLPPQQQQKYSNFEIITSYFWRCRTLALQLDTNEEVRIICIVDARSKFVNLLVPNGYYGNAIALPAAITTVGKLIENPLTYALDLVKKAKANVTEEYMHSMADLLVIKGRPHFTTANACLVSDVTRAGFRDVDFGWGKAVYGGLARAGDGTNPGISTIYIPFKNAKGEEGFVIPVFFPTQVIERLVKELDKVLKNNINSPTMGDRKSGIINSSL* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1413 461 Pfam Transferase family 8 398 - -
Mtr6g1413 461 Gene3D - 7 211 IPR023213 -
Mtr6g1413 461 PANTHER ALCOHOL ACYLTRANSFERASE 7 442 - -
Mtr6g1413 461 Gene3D - 212 436 IPR023213 -
Mtr6g1413 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1413 Mtr-Chr6 22397784 22406279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1413 8 390 Monolignol Biosynthesis Gene Families AT5G48930 28.535 2.33e-45 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1413 K19861 - gmx:100797017 637.106