Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1393 ATGGCTTTCACTACCTCAATCCTAGCTGAAAAGAAGAACAAGATTTTGTTTATATTGGGTGCAACAGGAACTGGGAAAACTAAACTTTCCATCAACTTGGGTACTCGTTACCCCGCTGAAATCATCAACTCGGACAAAATTCAAGTCTATAAGGGTCTTCATATTGTCACAAATAAGGTGCCGGAATCTGAACGTTGTTCGATTCCGCATCACTTATTAGGCATCATCGATGATCCTGAATATGATTTTACTATGAACGATTTTTGCAAGAACGTGCTTGAATCCATAGATCTCATAATTGGCAATGGACGCCTACCTATTATTGTAGGAGGGTCCAATTCTTATATAAAAAAATTGGTTGAAGAGCCAACCATTGCTTTTCTTTCAAAATATGACTGTTTTTTCATTTGGGTAGATGTGTCTTTGCCTACTCTATTTCAATATGTAGGGAAAAGAGTTGATGAAATGGTTGAGTCAGGGATGGTTGATGAGATTCGAGAATATTATGCACCTGGGGCAGACAACTCAAAGGGAATTAGAAGGGCTATTGGGGTTCCTGAGCTTGATTCTTTTTTTCAAATAGAAAAGAAAAATGACATTGATGATGCTCAAAAGGAAAAGATATTGGCCGAAGCTATCAGAAAAACCAAACAGAACACTTGCATATTGGTTCAAAATCAACTCTTGAAGATCAAGAATATGGCTCAAATCCTTGGGTCGATGGTATACAAGATTGATTCTACGGAAGTCTTTGAGGCCCTTCTGTAG 768 0.3802 MAFTTSILAEKKNKILFILGATGTGKTKLSINLGTRYPAEIINSDKIQVYKGLHIVTNKVPESERCSIPHHLLGIIDDPEYDFTMNDFCKNVLESIDLIIGNGRLPIIVGGSNSYIKKLVEEPTIAFLSKYDCFFIWVDVSLPTLFQYVGKRVDEMVESGMVDEIREYYAPGADNSKGIRRAIGVPELDSFFQIEKKNDIDDAQKEKILAEAIRKTKQNTCILVQNQLLKIKNMAQILGSMVYKIDSTEVFEALL* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1393 255 Gene3D - 12 253 IPR027417 -
Mtr6g1393 255 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 1 254 - -
Mtr6g1393 255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 172 IPR027417 -
Mtr6g1393 255 Pfam IPP transferase 130 228 - -
Mtr6g1393 255 Pfam IPP transferase 48 122 - -
Mtr6g1393 255 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 254 IPR039657 -
Mtr6g1393 255 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 142 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1393 Mtr-Chr6 21677398 21678165 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1393 90 249 C2H2 Transcription Factor Family AT2G27760 29.570 6.12e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1393 K10760 - gmx:100817288 347.436