Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1389 ATGGCTTTCACTACCTCAATCCTAGCTGAAAAGAAGAACAAGATTTTGTTTATATTGGGTGCAACAGGAACTGGGAAAACTAAACTTTCCATCAACTTGGGTACTCGTTACCCCGCTGAAATCATCAACTCGGACAAAATTCAAGTCTATAAGGGTCTTCATATTGTCACAAATAAGGTGCCGGAATCTGAACGTTGTTCGATTCCGCATCACTTATTAGGCATCATCGATGATCCTGAATATGATTTTACTATGAACGATTTTTGCAAGAACGTGCTTGAATCCATAGATCTCATAATTGGCAATGGACGCCTACCTATTATTGTAGGAGGGTCCAATTCTTATATAAAAAAATTGGTTGAAGAGCCAACCATTGCTTTTCTTTCAAAATATGACTGTTTTTTCATTTGGGTAGATGTGTCTTTGCCTACTCTATTTCAATATGTAGGGAAAAGAGTTGATGAAATGGTTGAGTCAGGGATGGTTGATGAGATTCGAGAATATTATGCACCTGGGGCAGACAACTCAAAGGGAATTAGAAGGGCTATTGGGGTTCCTGAGCTTGATTCTTTTTTTCAAATAGAAAAGAAAAATGACATTGATGATGCTCAAAAGGAAAAGATATTGGCCGAAGCTATCAGAAAAACCAAACAGAACACTTGCATATTGGTTCATGTGCTCACGCTTCAGATCGGAAGCCCTTGA 705 0.3844 MAFTTSILAEKKNKILFILGATGTGKTKLSINLGTRYPAEIINSDKIQVYKGLHIVTNKVPESERCSIPHHLLGIIDDPEYDFTMNDFCKNVLESIDLIIGNGRLPIIVGGSNSYIKKLVEEPTIAFLSKYDCFFIWVDVSLPTLFQYVGKRVDEMVESGMVDEIREYYAPGADNSKGIRRAIGVPELDSFFQIEKKNDIDDAQKEKILAEAIRKTKQNTCILVHVLTLQIGSP* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1389 234 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 172 IPR027417 -
Mtr6g1389 234 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 230 IPR039657 -
Mtr6g1389 234 Pfam IPP transferase 48 122 - -
Mtr6g1389 234 Pfam IPP transferase 130 221 - -
Mtr6g1389 234 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 142 225 - -
Mtr6g1389 234 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 1 230 - -
Mtr6g1389 234 Gene3D - 12 141 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1389 Mtr-Chr6 21651802 21657734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1389 90 194 C2H2 Transcription Factor Family AT2G27760 34.286 2.01e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1389 K10760 - gmx:100817288 323.168