Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1372 ATGGGCTCACTTCCTAAGGAAGTACCATATTCCCCAACATCTCACCATCTTAATTTATTGAAACAAGTTATTGATGGAAACAACATAGACACCCACTTAGTACGAAGTTACAGTCGAAGTTTCAATGGCTTTGCCGCCATACTCAACGACCAGCAAAGGGAAAAACTTGCTGGCATGAGAGGCGTTGTCTCTGTTTTTCCAAGTCAGGAGTTTCACCTTCAAACCACAAGGTCGTGGGACTTTCTTGGAATTCCTCAATCAATTAAAAGAGATAAAGTTGTTGAGAGTGATTTGGTGATTGGTGTCATAGATAGCGGAATTTGGCCAGAATCTGAAAGTTTTAATGATAAAGGTCTTGGTCCTATTCCAAAAAAGTGGAGGGGAGTTTGTGCAGGCGGCACTAATTTCAGTTGCAACAACAAGATCATCGGGGCACGATTTTATGATGATAAAGATAAGAGTGCAAGAGACGTTTTGGGTCATGGATCCCATACAGCATCAACAGCAGGTGGAAGTCAGGTGAATGATGTCAGCTTTTATGGTCTTGCAAAAGGCACTGCAAGAGGTGGAGTCCCATCTTCAAGAATTGCTGTATACAAAGTATGTATATCGAGTGTTAAGTGCATTTCTGACTCTATATTAGCTGCATTTGATGATGCCATTGCTGATGGAGTTGACATCATCACTATCTCTGCTGGTCCCCCACGCGCCCCCGATTTTCTACAAGATGTTATTGCCATTGGTTCTTTTCATGCCATGGAGAAAGGTATACTCACAACGCACTCTGTAGGAAACGATGGCCCGACCCCAAGTAGTGTTTTAAGTGGAGCACCTTGGTTAGTTAGTGTTGCTGCAACTACCATAGATCGTCAATTTATTGATAAGCTCGTTCTTGGAAATGGAAAGACTTTAATTGGTAAGTCAATTAATACCTTCCCTTCAAATGGCACAAAATTTCCAATAGTTTATTCTTGCCCGGCTAGAGGAAATGCATCGCATGAAATGTATGATTGCATGGACAAAAATATGGTGAATGGTAAGATTGTTTTGTGTGGAAAAGGAGGCGATGAAATTTTTGCTGATCAGAATGGTGCATTTGGTTCAATTATTAAAGCTACAAAGAATAATCTTGATGCTCCTCCAGTCACTCCAAAGCCTTCCATTTACTTAGGATCAAATGAATTTGTTCATGTTCAATCCTACACAAATTCCACTAAATATCCAGTAGCTGAAATTTTGAAGAGTGAGATCTTCCATGACAACAATGCTCCTAGAATTGTAGATTTCTCTTCTCGCGGCCCAAATCCTGTCATTCCTGAAATTATGAAACCAGATATAAGTGCCCCAGGAGTTGATATCCTTGCTGCTTGGTCACCTTTAGGTCTACCCTCAGTGGATTATGGTAATAGTGACAAAAGACGTGTTAAATACAACATAGAATCTGGAACCTCTATGTCATGTCCGCATGTTGCTGGAGTTGCTGCATATGTGAAATCATTTCATCCAAATTGGTCACCTGCAGCTATCAAATCTGCCATCATGACAACCGCTAACCTAGTGAAAGGTCCTTATGATGATTTGGCTGGAGAGTTTGCTTATGGATCTGGGAATATCAATCCACAACAAGCCCTTAACCCTGGACTTGTTTATGACATCACTAAGGAGGATTATGTGCAAATGCTTTGTAATTATGGTTATGATACTAACCAAATTAAACAAATTAGTGGAGATGATTCAAGTTGCCATGATGCATCCAAAAGATCCTTGGTGAAAGATATAAACTATCCTGCAATGGTATTTCTTGTACATAGGCATTTCAATGTCAAGATTCATAGAACAGTCACTAATGTTGGCTTTCACAACTCAACCTACAAAGCTACTCTTATCCATCATAATCCAAAAGTCAAGATTAGTGTCGAACCAAAAATTCTCTCATTCAGATCATTAAACGAGAAACAATCATTTGTTGTCACAGTTTTTGGGGAAGCAAAATCAAATCAAACTGTGTGTTCCTCATCACTTATTTGGTCAGATGAAACCCACAATGTGAAGAGTCCAATCATTGTGCAGAGAATATAA 2079 0.3963 MGSLPKEVPYSPTSHHLNLLKQVIDGNNIDTHLVRSYSRSFNGFAAILNDQQREKLAGMRGVVSVFPSQEFHLQTTRSWDFLGIPQSIKRDKVVESDLVIGVIDSGIWPESESFNDKGLGPIPKKWRGVCAGGTNFSCNNKIIGARFYDDKDKSARDVLGHGSHTASTAGGSQVNDVSFYGLAKGTARGGVPSSRIAVYKVCISSVKCISDSILAAFDDAIADGVDIITISAGPPRAPDFLQDVIAIGSFHAMEKGILTTHSVGNDGPTPSSVLSGAPWLVSVAATTIDRQFIDKLVLGNGKTLIGKSINTFPSNGTKFPIVYSCPARGNASHEMYDCMDKNMVNGKIVLCGKGGDEIFADQNGAFGSIIKATKNNLDAPPVTPKPSIYLGSNEFVHVQSYTNSTKYPVAEILKSEIFHDNNAPRIVDFSSRGPNPVIPEIMKPDISAPGVDILAAWSPLGLPSVDYGNSDKRRVKYNIESGTSMSCPHVAGVAAYVKSFHPNWSPAAIKSAIMTTANLVKGPYDDLAGEFAYGSGNINPQQALNPGLVYDITKEDYVQMLCNYGYDTNQIKQISGDDSSCHDASKRSLVKDINYPAMVFLVHRHFNVKIHRTVTNVGFHNSTYKATLIHHNPKVKISVEPKILSFRSLNEKQSFVVTVFGEAKSNQTVCSSSLIWSDETHNVKSPIIVQRI* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1372 692 Pfam Fibronectin type-III domain 592 689 IPR041469 -
Mtr6g1372 692 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 1 690 - -
Mtr6g1372 692 Pfam Subtilase family 96 528 IPR000209 GO:0006508|GO:0008236
Mtr6g1372 692 Gene3D - 289 419 - -
Mtr6g1372 692 PRINTS Subtilisin serine protease family (S8) signature 95 114 IPR015500 -
Mtr6g1372 692 PRINTS Subtilisin serine protease family (S8) signature 157 170 IPR015500 -
Mtr6g1372 692 PRINTS Subtilisin serine protease family (S8) signature 481 497 IPR015500 -
Mtr6g1372 692 Gene3D - 561 692 - -
Mtr6g1372 692 ProSiteProfiles Serine proteases, subtilase domain profile. 78 544 - -
Mtr6g1372 692 CDD Peptidases_S8_3 71 518 IPR034197 -
Mtr6g1372 692 CDD PA_subtilisin_like 296 412 - -
Mtr6g1372 692 Gene3D Peptidase S8/S53 domain 97 557 IPR036852 GO:0004252|GO:0006508
Mtr6g1372 692 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 690 IPR045051 -
Mtr6g1372 692 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 74 IPR037045 -
Mtr6g1372 692 SUPERFAMILY Subtilisin-like 77 545 IPR036852 GO:0004252|GO:0006508
Mtr6g1372 692 ProSitePatterns Serine proteases, subtilase family, serine active site. 482 492 IPR023828 -
Mtr6g1372 692 Pfam Peptidase inhibitor I9 11 73 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1372 Mtr-Chr6 21315017 21317494 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1372 1 692 Subtilisin-like Serine Gene Family AT5G59190 53.759 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1372 - - mtr:MTR_6g055410 1240.71