Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1363 ATGCTTAATTTTCACCTCAAAAACTCTTACTTTACTTCCCTCACAACTATAACTCCCTTCCTCTTTCTTCTACTCCTAAACCATGTTGAATCACAAGCTTCCATGGAACCTGTTCCTACTGATATCTCTCATCATAGATGGAATCCTTCCTTTGCAATCACAGCTGGTGCAGTACTTTGTTTACTTTTTATCCTAGGAATCGTGTTTTTCTACATCCGAAACTGCGTTGAATCGCGCATCGTTGTCACGAGAAGCAACACAACGGATTGTCCATGTTCATGTTCACAAGGTATAAACAAAGAACTACTCAACACTTTCCCTATCCTTTTTTACTCAACAATCAAAGACGTTAAAACAGATAAAGGACCATTGGAATGTGCAGTTTGTTTAACAGATTTCAAAGAACAAGACACTTTAAGATTACTACCTAAATGCAACCATGTTTTCCATCCTCAATGCATTGATTCATGGTTAGCTTCTCATGTCACTTGTCCCGTTTGTCGCGCAAATCTTAACCAAGATTCTTGTCAAGTTGCAATGACCATCCCAACCAATTTCAACAATGAACAAACATGTGAAGAAAATTCCGAAACCGTACCCGAAATAACTCTCAATAATACTACCAATGACCAAAACCAAAACCCAAACCAAATTGACTCTGACGCGAACAAAGGAGAAAGTATCAATCATGATGATGGCCATCCATCAAAATTGAAACTTTTGAGATCAAATTCAACTGGTCATTCATTGGTTGAACAAGTGAAGTGTGTAGAGAGATACACACTGATGTTACCAGAGGATGTTAGAAGGTACATTTTGGTTAACCATAGAAAAAGCTTTCAGCTTTCTATGAGCAACAACATGGTTAAAGGGTTATGTTGGAATGATAATGAAGGAATCAATGGTGATACAAAAGTAGAGAAATGGGTTTTGTGTGCTAAACATGGTTGA 951 0.3754 MLNFHLKNSYFTSLTTITPFLFLLLLNHVESQASMEPVPTDISHHRWNPSFAITAGAVLCLLFILGIVFFYIRNCVESRIVVTRSNTTDCPCSCSQGINKELLNTFPILFYSTIKDVKTDKGPLECAVCLTDFKEQDTLRLLPKCNHVFHPQCIDSWLASHVTCPVCRANLNQDSCQVAMTIPTNFNNEQTCEENSETVPEITLNNTTNDQNQNPNQIDSDANKGESINHDDGHPSKLKLLRSNSTGHSLVEQVKCVERYTLMLPEDVRRYILVNHRKSFQLSMSNNMVKGLCWNDNEGINGDTKVEKWVLCAKHG* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1363 316 CDD RING-H2_EL5_like 125 168 - -
Mtr6g1363 316 MobiDBLite consensus disorder prediction 204 223 - -
Mtr6g1363 316 Pfam Ring finger domain 125 168 IPR001841 -
Mtr6g1363 316 ProSiteProfiles Zinc finger RING-type profile. 126 168 IPR001841 -
Mtr6g1363 316 MobiDBLite consensus disorder prediction 204 235 - -
Mtr6g1363 316 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 214 - -
Mtr6g1363 316 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 217 294 - -
Mtr6g1363 316 SMART ring_2 126 167 IPR001841 -
Mtr6g1363 316 SUPERFAMILY RING/U-box 125 174 - -
Mtr6g1363 316 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 98 178 IPR013083 -
Mtr6g1363 316 PANTHER RING FINGER DOMAIN-CONTAINING 1 214 - -
Mtr6g1363 316 PANTHER RING FINGER DOMAIN-CONTAINING 217 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1363 Mtr-Chr6 21102287 21103893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1363 6 289 Rapid Response to Elicitors AT3G05200 35.034 8.20e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1363 K10664 - gmx:100782532 299.286