Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1362 ATGAGACTAACTCCTACCACTTCGGATATTGAGGTTTCTGGACTTGAAAAAAAAAATATAGGACGTATCACGCAAATAATTGGTCCGGTACTTGATGTAGTTTTTCCACCAGGGAAGATGCCTAATATTTACAACGCTCTGATAGTTCAAGGTCGAGATACTGTTGGCCAAGAAATTAACGTAACTTGTGAAGTACAACAATTATTAGGAAATAATAGAGTTAGAGCTGTAGCTATGAGTGCTACAGATGGTCTAAAGAGAGGAATGGTTGTGATTAACACGGGAGCTCCCCTAAGTGTTCCAGTCGGCGGAGCAACCCTAGGTCGAATTTTCAACGTGCTTGGAGAGCCTATTGATAATTTAGGTCCTGTAGATACTGGGACAACCTCTCCTATTCATAGATCCGCGCCTGCCTTTATACAGTTAGATACAAAATTATCCATTTTTGAAACAGGAATTAAAGTTGTAGATCTTTTAGCTCCTTATCGCCGTGGCGGAAAAATAGGACTTTTCGGTGGAGCTGGGGTAGGTAAAACAGTACTGATTATGGAATTGATCAATAACATTGCCAAAGCTCATGGAGGAGTATCCGTATTTGGTGGAGTAGGTGAGCGTACTCGTGAGGGAAATGATCTTTATATGGAAATGAAAGAATCCGGAGTAATTAATGAAAAAAATATTGCGGAATCAAAAGTAGCTCTAGTCTACGGGCAAATGAATGAACCGCCCGGAGCTCGTATGAGAGTTGGTTTAACTGCCCTAACTATGGCAGAATATTTCCGAGATGTCAATGAACAGGACGTCCTTCTATTTATCGACAATATCTTCACAAGCATCCAATTCTAA 846 0.4054 MRLTPTTSDIEVSGLEKKNIGRITQIIGPVLDVVFPPGKMPNIYNALIVQGRDTVGQEINVTCEVQQLLGNNRVRAVAMSATDGLKRGMVVINTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTGTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFTSIQF* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1362 281 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 277 IPR027417 -
Mtr6g1362 281 Gene3D - 98 281 IPR027417 -
Mtr6g1362 281 PANTHER F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT 1 280 - -
Mtr6g1362 281 PANTHER ATP SYNTHASE 1 280 - -
Mtr6g1362 281 Pfam ATP synthase alpha/beta family, beta-barrel domain 23 95 IPR004100 GO:0046034|GO:1902600
Mtr6g1362 281 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 152 276 IPR000194 GO:0005524
Mtr6g1362 281 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 19 97 IPR036121 GO:0046034|GO:1902600
Mtr6g1362 281 Gene3D - 18 97 - -
Mtr6g1362 281 CDD ATP-synt_F1_beta_N 19 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1362 Mtr-Chr6 21097628 21098978 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1362 3 260 Primary Pumps ATPases(2) AT1G20260 25.874 3.06e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1362 K02112 - vvi:4025008 512.301