Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1358 ATGAAGTTGAGTTGCAATGGGTGTCGTGTGCTTCGCAAAGGTTGCAATGATGATTGTATCATCAAGCCCTGCCTTGAGTGGATCAGTTCCTCTGAATCCCAAGGGCGTGCCACCCTCTTCCTTACCAAATTTTATGGTCGAATCGGTTTGCTGAATCTCCTCACCAATGCTACCAATCAAAATCAAAATCCTCAAGTTGTGTTTAAATCATTGTTGTACGAGGCATCTGGTAGATTGGTGAATCCCACATATGGGGTGCTTGGCTTATTCTGGACAGGGGATTGGAGTCGTTGTGAAGCTGCAGTTGAAGCTGTGTTGACTGGATCAAATATTAATGACAATTTTACAATGATTGATGGGCATACATCATCAGGTACAGTCAATGCTGAAAATCATGTTCTCCCCAAAACCTATGATATACGCCACGTGGCCAAAGGTACCAATGTGGACGTCAAAGGGAAGACTCAATTCAAAAGAGTTGGGAAAATTTTGAAGCCCAAGCCACGAGTTGGTTCAGTCAACTCGACTACCATGTTGAAATCCCTTTTGAAGAATACCAACATGGAAATTGGGGAGAGGTCATCAAGGGTTCAAACACAGAAAATCAATGAAGCTGTTGAGAATCAAGTGAATTTGGAACTCACTCTTGGCTTTGATTGCCAATCAACTAAGAGCAAGAAAATATTAGATAAATGA 696 0.4195 MKLSCNGCRVLRKGCNDDCIIKPCLEWISSSESQGRATLFLTKFYGRIGLLNLLTNATNQNQNPQVVFKSLLYEASGRLVNPTYGVLGLFWTGDWSRCEAAVEAVLTGSNINDNFTMIDGHTSSGTVNAENHVLPKTYDIRHVAKGTNVDVKGKTQFKRVGKILKPKPRVGSVNSTTMLKSLLKNTNMEIGERSSRVQTQKINEAVENQVNLELTLGFDCQSTKSKKILDK* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1358 231 PANTHER LOB DOMAIN PROTEIN 1 229 - -
Mtr6g1358 231 Pfam Lateral organ boundaries (LOB) domain 4 106 IPR004883 -
Mtr6g1358 231 ProSiteProfiles LOB domain profile. 3 111 IPR004883 -
Mtr6g1358 231 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1358 Mtr-Chr6 21001760 21002717 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1358 1 145 AS2 family AT1G68510 54.422 3.02e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr6g1358 LOB 1.3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1358 - - mtr:MTR_1g110840 404.831