Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1350 ATGGCATCAAAGAAGGTTCGGGTCGTAGCCAAAATTCGCGGCTTTTCTGATCCAGATACTGAAAATTCAAGAACTGTGGATTGGGTTTCTGTGAAGACTCAAGATTCTGGAGATGTTACTATCTCCTTTAAAGAACAATCTTCTAGTCGGTATTCAGTGGACTACTGCTATAACCAACATGATGATAATGAAATGATCTATTCAAGGGAAGTGAAGCCTCTTGTTTCGGCAGCTTTTGAAGGTTTTAACAGTACTGTTATTGCTCATGGAGCTAGAGGCAGCGGGAAAACTCACTTAATTCAGGGCTCTTTGGAGAGACCGGGTTTGGCAGCACTGGCTACTTCTGAGTTTCTCTCCATGGCTGAGAAAAATGGAAAATCTATAGCAGTTTCTCTCTACGAGGTTGATCATCAGGACCATGCTGTCGATTTATTAAATCCAGAACAACCACAAATTTTGGTGCTTGAAGATCACGGAAGAATCCAGTTTAAAGGACTCAGTCAGGCTCCTGTTAAATCCATTTCTGAGTTCCAGAATTTATACATCGCTGCATGTTCTGCAAACAAGGCTGCACCCAAAAAAGGCATTGAGCGTGCTCATAGAAGCCACATAGGATTAATTGTGCATGTCTTCTCCCAAAATGAAAGTATGAATGGTCTTGTGAGCAAAATGAATTTTGTGGATATGGCAGGTTACGAAGATGCTAGAAGGAAAAGTAGTGATGCCTCTGGTCATGTTGAGAATAACAAACTTAACAAGTCAATTTATGCCTTACTGAATGTTTGTCAGGCTTTGAGTACAAATGAAAGTCGTGTTCCCTTCCGGGAAAGTAAACTTACACGCATGTTGCAGGACTCCTTGAGGGGAACTAGCAAAGTTTTGTTGGTTTCGTGCTTGAATCCATCATTTTGCCAAGACACTGTTTACATGGTAAGCTTAGCATCACGGTCATGTCAATCGATTCATCAAACCCCCTTAGACTCCATGAAGAAAACTGCAAGTTCAACTAGACAGATAGCGACCTGGGATTCCACAAAGAAAAGTGCAAGTTCTGCAAGAGAGATAGTAACCTTAGATTCCACAAAGAAAAATGCAAGTTCAGCAAGAAAAATAGTGACCTTAGATTCCACAAAGAAAAATGCAAGCTCAGTAAGACAGAACGTGGCCACAGATTCCTCAAACAAAAAATCAAGCTCAGTAAGACAGACAGTAACCTTAGATTCCACAAAGAAAAGTGCAAGTTTAGTAAGACAGAACGTGGCCTCAGATTCTTCAAAGAAAATATCAAGTTCAGTAAGACAGACAGTAACCTTAGATTCCACAAAGAAAAGTGCAAGTTCAGCAATACAGACAGTGACCTCAGATTCCACAAAGAAAACTGCAAGTTCAGCAAGACAGACAGTGGCCTCAGATTCAACCAAAAAAACTGCAAGTTCAGCAATACATACTGTGGCCTCAGATTCCACCAAGAAAAGTGCAAGTTCAGCCATACAGATAGTAGCCTCAAATTCAACAAAGAAAAGCGCAAATTCAGCAATACTGACAGTGACTTATCGCAAAAAAAAGATACCCCAAAGTGTATCAGCGTCAACAACGAAATTACCAGGCTCCATATCTCATATAAAGGAAAATGGTGTTATTGCAACAAATTCTGCAATAAAAGGAAGGAAATTGTTTGACGAAGCCAGCCACTCTGCTGTTAAAGCAGAGAAGGAAATTTCCATTGCTGATGTTACTAGAGCATCGGAGTCTTTATTGGACAATTCTTTATCAGAAGATGGAAATCACGATGAACTAAACTCTAGAGTTGAAAAGGATAACTCATCTTTGAATGCTAGCAGTGAAGTTGAATTTGATCCCACAGTGGAAAAGGTTATTTCATCTGAGGATAAACACCCATATATCATTAATTACTCCAAAGATTTGTCGATAGCAGATGAAGGTCATAACATGAACAAGGAGAACAACAACTTAATTGAAAATGAAGATTTTTCACCACCCATTAGTTCTCAATTGCGTGAACTTCAATCTCTCGTTTCATCAACTCCATTGTGTATGCAGTTACCAGAGAACGAATGCATTTCACATGACGATGATCAGATTTCTGCTAAAATTGCAGAACCAACAACTCTTGATACCAAAAGACGAGATGTAATGAATACCAAAAGTCCTTGGGAAACATTCAACAAGCACGGTTCTGAAATGGAGAATTCAACTGAAATTACAGAACCAAGAACTCCTGATGCTGGAAGAGGGGATGTAATGAATACCAAAAGTCCTTGGGAAACATTCAACATGAATGGTTCTAGAATGAAGAATTCCACTGAAATTACAGAACCAAGAACTCCTGATACTGGAAGACGAGATGTAATGAATACCAAAAGTCCTTGGGAAACATTCAATTTGCATGGTTCTGGAATGAAGAATTCCCTTGTTAAGGACTACCTTAGAATTTTAAACACAGCTGAAAAGGATGAATTAAAGAAGTTAAAGGGAATTGGAGAGAAGAGAGCAACCTATATACTTGAACTTCGTGAAGAATCTCCAGAACCTTTCAAGAGTCTTGATGATTTGAAGGACATTGGACTTTCTGAAAAACAGATTAAGGGAATGATGAAGAAGGAAGTTGGAGAGCTTTTCAATTAG 2646 0.3915 MASKKVRVVAKIRGFSDPDTENSRTVDWVSVKTQDSGDVTISFKEQSSSRYSVDYCYNQHDDNEMIYSREVKPLVSAAFEGFNSTVIAHGARGSGKTHLIQGSLERPGLAALATSEFLSMAEKNGKSIAVSLYEVDHQDHAVDLLNPEQPQILVLEDHGRIQFKGLSQAPVKSISEFQNLYIAACSANKAAPKKGIERAHRSHIGLIVHVFSQNESMNGLVSKMNFVDMAGYEDARRKSSDASGHVENNKLNKSIYALLNVCQALSTNESRVPFRESKLTRMLQDSLRGTSKVLLVSCLNPSFCQDTVYMVSLASRSCQSIHQTPLDSMKKTASSTRQIATWDSTKKSASSAREIVTLDSTKKNASSARKIVTLDSTKKNASSVRQNVATDSSNKKSSSVRQTVTLDSTKKSASLVRQNVASDSSKKISSSVRQTVTLDSTKKSASSAIQTVTSDSTKKTASSARQTVASDSTKKTASSAIHTVASDSTKKSASSAIQIVASNSTKKSANSAILTVTYRKKKIPQSVSASTTKLPGSISHIKENGVIATNSAIKGRKLFDEASHSAVKAEKEISIADVTRASESLLDNSLSEDGNHDELNSRVEKDNSSLNASSEVEFDPTVEKVISSEDKHPYIINYSKDLSIADEGHNMNKENNNLIENEDFSPPISSQLRELQSLVSSTPLCMQLPENECISHDDDQISAKIAEPTTLDTKRRDVMNTKSPWETFNKHGSEMENSTEITEPRTPDAGRGDVMNTKSPWETFNMNGSRMKNSTEITEPRTPDTGRRDVMNTKSPWETFNLHGSGMKNSLVKDYLRILNTAEKDELKKLKGIGEKRATYILELREESPEPFKSLDDLKDIGLSEKQIKGMMKKEVGELFN* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1350 881 ProSiteProfiles Kinesin motor domain profile. 5 320 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr6g1350 881 MobiDBLite consensus disorder prediction 586 616 - -
Mtr6g1350 881 MobiDBLite consensus disorder prediction 758 780 - -
Mtr6g1350 881 MobiDBLite consensus disorder prediction 722 744 - -
Mtr6g1350 881 PANTHER KINESIN-LIKE PROTEIN KIN-10C 773 874 - -
Mtr6g1350 881 PANTHER KINESIN-LIKE PROTEIN KIN-10C 481 766 - -
Mtr6g1350 881 PANTHER KINESIN-LIKE PROTEIN KIN-10C 5 482 - -
Mtr6g1350 881 Pfam Kinesin motor domain 20 316 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr6g1350 881 Gene3D - 807 879 - -
Mtr6g1350 881 PRINTS Kinesin heavy chain signature 81 102 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr6g1350 881 PRINTS Kinesin heavy chain signature 223 241 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr6g1350 881 PRINTS Kinesin heavy chain signature 272 293 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr6g1350 881 SUPERFAMILY RuvA domain 2-like 816 874 IPR010994 -
Mtr6g1350 881 Gene3D Kinesin motor domain 1 321 IPR036961 -
Mtr6g1350 881 MobiDBLite consensus disorder prediction 714 792 - -
Mtr6g1350 881 PANTHER KINESIN-RELATED 773 874 IPR027640 GO:0003777|GO:0007018
Mtr6g1350 881 PANTHER KINESIN-RELATED 481 766 IPR027640 GO:0003777|GO:0007018
Mtr6g1350 881 PANTHER KINESIN-RELATED 5 482 IPR027640 GO:0003777|GO:0007018
Mtr6g1350 881 MobiDBLite consensus disorder prediction 590 604 - -
Mtr6g1350 881 MobiDBLite consensus disorder prediction 377 482 - -
Mtr6g1350 881 Pfam Helix-hairpin-helix motif 819 867 - -
Mtr6g1350 881 SMART kinesin_4 3 329 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr6g1350 881 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 317 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1350 Mtr-Chr6 20780913 20787405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1350 5 364 Calmodulin-binding Proteins AT5G65930 27.005 2.15e-27 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1350 K10403 - fve:101312503 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1350 6 20780913 20787405 Mtr6g1350 6 20780913 20787405 ECH