Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1349 ATGGAAGTTGCAAAATTCAAGGCCCCTGACACTACAGATGTCATGAGAGCAAAAGACGGAGTAGATAACATCATCAGAGAAGCAATTGGAAATCAACCTTTCTTTTATTTTCCAACAAGGGTCGGTGACAGCCCAGGACAGTTGGTTCAATTACTTCATACTTTTGATCAGCAAGAATATCCAGGGTGGCCTTTGCTCTATCCTCTGAAGGCCCCGTCGGACAAATGTGAGAAGTGTCCTCAAGAGTTTTGCTCCACCATTAACTATAGAAGACATTCACCTCTACATCACCGATTCAAAAAGCTTGACAAGGACACTTCAAAAACTAGAGATTTCCTAGGGGCATATTGGGATAAGCTCTCTGTAGAAGAAGCAAAGGAAGTTGTATCATTCGAAAATGTGATGCTGGAGGGAGTTCCAGGGTCTTCAATTTTGGATACTTTGACGACTCTTACTCAAAAACAAGGATTTTTTTTACTTCCGCCGTGTTATCTGAGGGCTGGTGCTGCCCTATTGGATATTCTTGAATCTAAACCTTCAAGTTTTCCCATACCTTCCCATGAGCTGTTCAATATCCTTGATGATGCTAGTGAAGGAACATTTTTATTGGGGACAGCAGCGTCCATGCAAAAATATATTTTTCTTGGAGGGGATGAAAAAATTGGTCTTGAACCCAAAAATGTAGTTGCTTGCACAAGCTTCTTGCTCGAACAGATATTGGTTAAGGCATGGCTTGCCGACAAGGATGCTGAAGCTCTGAGGTGCCAGAAGCAATTGGTGGACGAGGAAGAAGCTGCTAAGAAAAGACAAGCTGAAGTTTTGAAGAGGAAACGCGAGAAAAAGATTAGACAAAAAGAACAGAAGGCTAGGGAACAAAGTCACAAGCTTAAGGTAGAAACTAAAGGGAATGTTGACACTACAGTGAAGACTTTATCATCAGCAGAAAAATCTTTGGATACATATGATGTTGAAGCTCAAAATCCAGAGTTTGCAAATAATGCTCCTTCACATGTACCTTTTCAACGCCCTGACGTCAATGAAGAAAAATATGGGGATACTCAGTCAGGAAATGCGTTTGGTTCCGATCAGATTATTGGACAGCCAGAACGTGAACTGGATCGTCCGTGCAGAGCAATTGCAAGATGGCAAGAGCTGCCAAAACCCCCCCAGCACACCGTTGTCAGTGATCTGCATACAAAGAAGAATCCTCCAATTTCAAAGCCTGAAGTCGTTCAGCAATATGGAACCCGCGATTATCAGAGGGAAGATACTATAGTTAATACTGCTGGTAAAGCATGGCTTGACAAGCCAAAACCTGAAACTGACAGGATGGTTTTAAAAACCGGAGCGAAGATCAAAGCTGACCTAGTTAAGAATCATGATGTTTTGATAGGATCTATCCCAGTCAATTTAGTCAAGAATCCTGAAGTTTTGATAGGATCTATACCTGTCAATCTAGTTAAGAATCCTGAAGTTTTGATCGGATCTATACCTGTCAATCTAGGCAAGTGCAGCAAATCAGTAGGTAATGGGGTGGCATCTCAAGAAAAATGTTTGATTGAGAATGTGGAAAAGCTGAGTAATTCTCAGGATAAGCCAAAGAAACCTGATTTTGTTAAGACTGGAAATGACCAATCAACAGTTAAGCTTTCGACACCAGTTAGTCAGTTTGAAACTAAAGATCTATTTCCAGTTCAAAGTCCTGAGGCAGAAGTTGATGCAGTTAATAGAGGTGAAGGTTTTCAAAACTTGTCAAAGTTGTCTAGTTATGGTAGTGATATTGGTTTTGAAAATAAAATCTCCAATCCAGAGGGTAGAGTAGATCCAGGAAAAGTCCAGTTTTCCAGCCAGGCTGCAAAAGCCTTTCTTGCACAAAGATGGGAAGAAGCTATGTCATCAAGTCATGTGAAGTTGGTTGTTTCGCTTGACGCTGAATCTCCTGGGAGCCACAAGATACAGGATTTGAAGGTAGCAGCATGTGAATCTTCTGATGTTGATAGATGCAGCAACATTCTGGCAAACGAAGAGAACAAGTCACTGTCAACCACCAAAGCTTCGAAATCCAAACGCAGTGGGAAGTCTAAAACAGGAACCAATTACAAGTATATTCCGAAAGAGAACACAACCTAA 2130 0.4131 MEVAKFKAPDTTDVMRAKDGVDNIIREAIGNQPFFYFPTRVGDSPGQLVQLLHTFDQQEYPGWPLLYPLKAPSDKCEKCPQEFCSTINYRRHSPLHHRFKKLDKDTSKTRDFLGAYWDKLSVEEAKEVVSFENVMLEGVPGSSILDTLTTLTQKQGFFLLPPCYLRAGAALLDILESKPSSFPIPSHELFNILDDASEGTFLLGTAASMQKYIFLGGDEKIGLEPKNVVACTSFLLEQILVKAWLADKDAEALRCQKQLVDEEEAAKKRQAEVLKRKREKKIRQKEQKAREQSHKLKVETKGNVDTTVKTLSSAEKSLDTYDVEAQNPEFANNAPSHVPFQRPDVNEEKYGDTQSGNAFGSDQIIGQPERELDRPCRAIARWQELPKPPQHTVVSDLHTKKNPPISKPEVVQQYGTRDYQREDTIVNTAGKAWLDKPKPETDRMVLKTGAKIKADLVKNHDVLIGSIPVNLVKNPEVLIGSIPVNLVKNPEVLIGSIPVNLGKCSKSVGNGVASQEKCLIENVEKLSNSQDKPKKPDFVKTGNDQSTVKLSTPVSQFETKDLFPVQSPEAEVDAVNRGEGFQNLSKLSSYGSDIGFENKISNPEGRVDPGKVQFSSQAAKAFLAQRWEEAMSSSHVKLVVSLDAESPGSHKIQDLKVAACESSDVDRCSNILANEENKSLSTTKASKSKRSGKSKTGTNYKYIPKENTT* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1349 709 MobiDBLite consensus disorder prediction 671 709 - -
Mtr6g1349 709 MobiDBLite consensus disorder prediction 275 294 - -
Mtr6g1349 709 ProSitePatterns Zinc finger C2H2 type domain signature. 76 97 IPR013087 -
Mtr6g1349 709 MobiDBLite consensus disorder prediction 526 545 - -
Mtr6g1349 709 Coils Coil 260 295 - -
Mtr6g1349 709 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1349 Mtr-Chr6 20761312 20771106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1349 19 706 C2H2 Transcription Factor Family AT4G25610 35.971 1.64e-105 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1349 - - mtr:MTR_6g053660 1383.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1349 6 20761312 20771106 Mtr6g1349 6 20761312 20771106 ECH