Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1347 ATGGCATCTTCAGATGTTGATTGGAAACCAAAGATTGGAATGGGATTTGATTCTATGGAAGAGGCTAATAAGTTTTGGCTTGCTTATAGTTTCCGTGTGGGCTTCGGAGTTAGAGTACGTTTCGCAAACAAAAAAGAAGATGGTAGCGTATCGTCATGTCGATTGGTTTGTTGTAAGGAATGGCTAAAAAGGAAGGAGAAAAGATATGCATATGAAGGAAAATATACGAGAGCCGATGTTAGAACAAATTGCCCTGTAAGAATTACACTTTCTCGTAAGAATGGAAAGTTGGTCATCCATGACTTTGAAGAAGAACATAACCATGATCTACAAAATTCTAAGACAACACACATGCTTCGGTCACATAGAAAGATAATTGAGGTGCAAGCATACGAGATTGATTTGGCTAATGACTCTGGATTAAGGCAGAAGTCAACATTTCAACTTTTGAGCACACAAGCAGGGCACATAGCTAATGTTGGATTTACAGAGGTGGATGTAAGAAACTACATCACTGCAAGAAGAAAAAGAAGTATGGCATATGGTGAGATTGGATGTCTTTCACAATATTTTCAACGACAATTGTTGGAGAATCCATCCTTCTTTCATGCATATCAGATCGATGTAGAAGAACATATTACAAATGTGTTTTGGTGTGATGCACAGATGATTTTGGATTACGGGTATTTTGGCGATGTTGTTTCTTTGGACACCACGTACTGTACCAACTATGCCAATAGACCACTTGCTTTTTTTCTTTTCTTTTCTGGTTTCAACCATTATAGAGGTTCAGTCATATTTGGGGCGGCACTAATGTATGATGAGACAAGTGAGTCATTTAGATGGTTGTTTGATACATTCTTACAGGCACACAACAACAAAAAACCAAAGACGATCTTCACTGACCAAGATCAAGCAATGGCAAGGGCAGTTGCAGATGTGATGCCCGAGACTCATCATGGTTTATGCACATGGCATTTGTTACAAAATGGAGTTAAACATCTTGGGAACATGATGAAGGGAGGATCTTCTTTGCTTATTGATATCAAAAAATGCATGTATGATATTGACATTGAAGCAGTTTTTGAGAAACTTTGGTTTGACATGATCCATAAATTTAATATTCATGACAAATCTTGGATCATTTCAACTTATGAGCTTAAAAAAAATGGCTGCATGTTATATGAAGGGAGTGTTAACACTTGGCATGCGAAGTACACAAGTTAG 1227 0.3757 MASSDVDWKPKIGMGFDSMEEANKFWLAYSFRVGFGVRVRFANKKEDGSVSSCRLVCCKEWLKRKEKRYAYEGKYTRADVRTNCPVRITLSRKNGKLVIHDFEEEHNHDLQNSKTTHMLRSHRKIIEVQAYEIDLANDSGLRQKSTFQLLSTQAGHIANVGFTEVDVRNYITARRKRSMAYGEIGCLSQYFQRQLLENPSFFHAYQIDVEEHITNVFWCDAQMILDYGYFGDVVSLDTTYCTNYANRPLAFFLFFSGFNHYRGSVIFGAALMYDETSESFRWLFDTFLQAHNNKKPKTIFTDQDQAMARAVADVMPETHHGLCTWHLLQNGVKHLGNMMKGGSSLLIDIKKCMYDIDIEAVFEKLWFDMIHKFNIHDKSWIISTYELKKNGCMLYEGSVNTWHAKYTS* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1347 408 Pfam FAR1 DNA-binding domain 24 111 IPR004330 -
Mtr6g1347 408 Pfam MULE transposase domain 233 330 IPR018289 -
Mtr6g1347 408 PANTHER OS03G0181600 PROTEIN 6 399 - -
Mtr6g1347 408 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 6 399 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1347 Mtr-Chr6 20735135 20737123 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr6g1347 MULE 3.1e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1347 - - cam:101507984 538.11