Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1327 ATGGATATACAAGAAATTCTCAATATATTTAATGCAAAAAATGTATCCCAAGTCAATGAGGATTGTTCTGAGGGTTTGGGAGGTAATAATCAGTCGGAGAGCGATGATTGTTCATCCGATGAAAACGAAGGTAACACTGAAGCAGAAACTAACAATGAAGGGTATGGATGCAACTTTGATTCTGAAAATGGTATAGAATGTGCTGCTGACATAGAGAAAATTAATTTTAAGGAGACATGTTCGGAAGAAATAATGAGTTACCATTTTCCGAGTCGTGAAGTTGCATTCATGTTTTATAACTGGTATGGTTGTTCACATGGATTTGCCGGTAGAAAGAGCCGGGTTGTTAGGAATGTAAAAGGTGAAATTGTGCAACAAACCTTTCTTTGCGAGAGGAATAGAAATCCTGATGTTCGGAAAAGAGAGCATAAACCTACTAGTCGGTGTGATTGCGAAGCAAAAATTCAAGTACATATTGATTTCGATAGCGGGCGTTGGTACATATCAAATGAATACAATGAGGAAATCTGGCATTCCAACGTCACAGATTTATGGTTATTTTGCTACACAGGCTGGTGGTTTTGA 585 0.3778 MDIQEILNIFNAKNVSQVNEDCSEGLGGNNQSESDDCSSDENEGNTEAETNNEGYGCNFDSENGIECAADIEKINFKETCSEEIMSYHFPSREVAFMFYNWYGCSHGFAGRKSRVVRNVKGEIVQQTFLCERNRNPDVRKREHKPTSRCDCEAKIQVHIDFDSGRWYISNEYNEEIWHSNVTDLWLFCYTGWWF* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1327 194 Pfam FAR1 DNA-binding domain 98 170 IPR004330 -
Mtr6g1327 194 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 184 - -
Mtr6g1327 194 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 15 184 - -
Mtr6g1327 194 MobiDBLite consensus disorder prediction 22 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1327 Mtr-Chr6 20079469 20080565 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr6g1327 FAR1 2.7e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1327 - K17604 mtr:MTR_6g053140 395.586