Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1323 ATGGCTGATGTTTTACTTGGAACTGTGATTCAAAACCTCGGATCTTTTGTTCGAGAGGAGCTTTCGACCTTTTTGGGTGTTGAAGAATTGACACAAAAGCTATGTGGAAATCTCACCGCAATTCGTGCTGTCCTCCAAGATGCTGAAGAGAAGCAACTAACAAGCCGTGTTGTGAAAGATTGGCTGCAGAAGCTGACTGATGTTGCCTATGTTCTTGATGATATATTGGATGATTGTACAATAACATCAAAAGCACATGGAGACAACAAGTGGATCACCCGTTTCCATCCTAAGAAGATTTTGGCTCGTCGGGATATTGGAAAGAGGATGAAGGAGGTTGCTAAAAAGATTGATGTTATTGCTGAAGAAAGGATCAAGTTTGGATTACAAGCGGTAGTCATGGAGGATCGCCAACGAGGAGATGATAAATGGCGCCAAACTTTTTCTGTCATCACTGAACCGAAAGTATATGGAAGAGATCGTGACAGAGAGCAAGTTGTTGAGTTTCTTCTAAGTCATGCTGTCGATAGTGAAGAACTCTCTGTCTATTCCATTGTTGGTGTTGGTGGGCAAGGAAAAACAACACTTGCTCAAGTGGTCTTCAATGATGAAAGGGTAGATACACACTTTAACTTGAAAATATGGGTGTGTGTTTCTGAGGATTTTAGTATGATGAAAGTTTTGCAGTCCATCATAGAATCCACCGATGGAAAAAATCCAGATCTCTCGTCTTTAGAATCAATGCAAAAGAAGGTTAAAAATATTTTGCAAAACAAAAGGTATCTACTTGTTCTTGATGATGTGTGGAATGAAGACCAAGAGAAATGGAATCAGTTCAAGTATTTTCTGCAACGTGGAAATGGCACGAAAGGTGCATCAGTTTTGGTCACAACCAGACTTGACATTGTTGCATCAATCATGGGAACTTATCCTGCTCATCATTTGTTAGGCTTATCTGATGATGCCATCTGGTATTTGTTTAAACAAAAAGCTTTTGAAACAAATAGAGAAGAGCGTGCAGAGCTTGTGGCAATAGGCAAGGAGTTAGTGAGAAAATGTGTGGGTTCTCCTCTTGCCGCAAAAGTACTAGGAAGCCTTTTGCGCTTTAAAACTGAGGAACATCAATGGCTTTCTGTAAAGGAAAGTAAGTTTTGGAGCTTATCCGAGGACAATCCTATCATGTCTGTATTGAGACTCAGCTACTTTAATTTGAAATTATCACTGAGGCTGTGTTTTACTTTTTGTGCGGTTTTTCCTAAGGATTTTGAAATGGTGAAGGAAGAACTGATCCATCTTTGGTTGGCTAATGGATTCATCTCTTCCGTTGGAAATTTAGAGGTGGAGCATGTTGGTCAAGAAGTGTGGAATGAATTATATGCGAGATCATTTTTTCAAGAAGTCAAAACTGATAAAAAGGGTGAGGTTACATTCAAAATGCATGATTTAATTCATGATTTAGCTCAGTCCATTACAGGAGAAGAATGTATGGCTTTTGATGATAAAAGCTTGACTAATTTGTCTGGTAGAGTTCACCATATAAGTTTTTCCTTTATTAATTTGTATAAACCATTCAACTACAACACCATCCCTTTTAAGAAAGTTGAATCTTTGCGAACTTTTCTTGAGTTTTATGTGAAGCTTGGAGAGTCAGCTCCATTGCCATCAATACCTCCTCTTAGAGCATTACGTACAAGGTCTTCGCAACTTTCGACACTAAAGAGTTTAACACATCTGAGGTACTTGGAAATTTGTAAAAGTTGGATCAAGACCTTGCCTGAGTCTGTTTGTAGGTTGCAGAATTTGCAAATTCTAAAACTTGTTGGTTGTCCACTTCTTTCTAGTCTTCCCAAAAAATTGACACAGCTTCAAGATCTCAGGCATCTTGTGATTAAATATTGCAATTCATTAGATTCAATGCCTTCCAATATCAGTAAGTTAACTTGTCTCAAAACTTTGAGCACTTTCATTGTGGAATCGAAGGCGGGGTTTGGTTTAGCACAGTTACATGACCTACAACTAGGAGGCAAGCTACACATCAGAGGCCTTGAGAATGTATCTAGTGAATGGGATGCTAAAGAAGCTAATTTGATTGGTAAAAAGGAGTTAAATCGCTTGTACCTGTCATGGGGTAGTCACGCTAATTCGCAAGGTATTGATACTGATGTTGAGCGAGTACTTGAAGCCCTTGAGCCTCACACTGGTCTCAAGGGTTTTGGGATTGAGGGTTATGTGGGAATACATTTACCACATTGGATGAGAAATGCATCTATTTTGGAAGGCTTGGTCGATATTACATTCTACAACTGTAACAACTGTCAGCGGCTTCCTCCACTTGGTAAATTACCTTGTTTAACCACTCTTTATGTATGTGGAATCAGAGATTTAAAGTACATTGATGATGACATATATGAATCTACATCCAAGAGGGCTTTCATTTCATTGAAGAATTTAACTCTGTGTGGTTTACCAAACTTAGAGAGGATGTTGAAAGCTGAAGGCGTAGAGATGCTACCACAACTTTCCTACTTTAACATTACAAATGTTCCCAAGTTGGCATTGCCATCCCTTCCATCTATTGAACTCCTTGATGTTGGTGAAATAAAATACCGGTTCTCGCCTCAAGATATTGTTGTGGATTTATTCCCAGAGAGAATTGTGTGTAGTATGCATAATCTTAAATTTCTTATCATCGTAAACTTCCATAAACTCAAGGTATTACCTGATGATCTTCACTTTCTTAGTGTCCTTGAGGAGCTTCACATTTCAAGGTGTGATGAACTTGAGTCTTTTTCGATGTATGCGTTCAAAGGTTTGATTTCTCTTCGAGTTTTGACCATTGATGAATGTCCTGAATTAATATCCTTGTCAGAAGGTATGGGAGACTTGGCTAGTCTTGAGAGACTTGTAATCCAAAATTGTGAACAACTTGTTTTACCAAGTAATATGAACAAACTAACTTCCCTTCGTCAAGTGGCAATTTCGGGCTACCTTGCAAACAACCGGATATTAGAGGGCTTAGAAGTTATCCCCTCCCTTCAAAATTTGACTCTATCATTCTTTGATTACTTGCCTGAATCGTTGGGAGCCATGACTTCTCTTCAAAGAGTAGAAATCATTTTTTGTCCAAATTTAAAGTCGCTACCAAACAGCTTTCAAAACCTCATAAACTTGCATACGTTGCTTATTTTTCGATGTTCTATGTTGGTGAAACGATGCAAGAAAGGAACTGGGAAAGATTGGCAAAAGATAGCTCACGTTCCTGAATTGGAGTTAATTGCAGAAGACACATACTATATGCGTAATTGGAAGGAGGAAGATAGAGATATTTTGCGCCATCGTTATCAGGCTATCGATATATTTTTCAGGAATCAGTTTAAATTTATAGTTGATGCATTGTGA 3399 0.3848 MADVLLGTVIQNLGSFVREELSTFLGVEELTQKLCGNLTAIRAVLQDAEEKQLTSRVVKDWLQKLTDVAYVLDDILDDCTITSKAHGDNKWITRFHPKKILARRDIGKRMKEVAKKIDVIAEERIKFGLQAVVMEDRQRGDDKWRQTFSVITEPKVYGRDRDREQVVEFLLSHAVDSEELSVYSIVGVGGQGKTTLAQVVFNDERVDTHFNLKIWVCVSEDFSMMKVLQSIIESTDGKNPDLSSLESMQKKVKNILQNKRYLLVLDDVWNEDQEKWNQFKYFLQRGNGTKGASVLVTTRLDIVASIMGTYPAHHLLGLSDDAIWYLFKQKAFETNREERAELVAIGKELVRKCVGSPLAAKVLGSLLRFKTEEHQWLSVKESKFWSLSEDNPIMSVLRLSYFNLKLSLRLCFTFCAVFPKDFEMVKEELIHLWLANGFISSVGNLEVEHVGQEVWNELYARSFFQEVKTDKKGEVTFKMHDLIHDLAQSITGEECMAFDDKSLTNLSGRVHHISFSFINLYKPFNYNTIPFKKVESLRTFLEFYVKLGESAPLPSIPPLRALRTRSSQLSTLKSLTHLRYLEICKSWIKTLPESVCRLQNLQILKLVGCPLLSSLPKKLTQLQDLRHLVIKYCNSLDSMPSNISKLTCLKTLSTFIVESKAGFGLAQLHDLQLGGKLHIRGLENVSSEWDAKEANLIGKKELNRLYLSWGSHANSQGIDTDVERVLEALEPHTGLKGFGIEGYVGIHLPHWMRNASILEGLVDITFYNCNNCQRLPPLGKLPCLTTLYVCGIRDLKYIDDDIYESTSKRAFISLKNLTLCGLPNLERMLKAEGVEMLPQLSYFNITNVPKLALPSLPSIELLDVGEIKYRFSPQDIVVDLFPERIVCSMHNLKFLIIVNFHKLKVLPDDLHFLSVLEELHISRCDELESFSMYAFKGLISLRVLTIDECPELISLSEGMGDLASLERLVIQNCEQLVLPSNMNKLTSLRQVAISGYLANNRILEGLEVIPSLQNLTLSFFDYLPESLGAMTSLQRVEIIFCPNLKSLPNSFQNLINLHTLLIFRCSMLVKRCKKGTGKDWQKIAHVPELELIAEDTYYMRNWKEEDRDILRHRYQAIDIFFRNQFKFIVDAL* 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1323 1132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 415 IPR027417 -
Mtr6g1323 1132 Gene3D - 317 400 IPR042197 -
Mtr6g1323 1132 Gene3D - 6 121 - -
Mtr6g1323 1132 PANTHER DISEASE RESISTANCE PROTEIN RP 27 930 IPR044974 GO:0006952
Mtr6g1323 1132 PANTHER OS05G0414200 PROTEIN 27 930 - -
Mtr6g1323 1132 Pfam Rx N-terminal domain 6 87 IPR041118 -
Mtr6g1323 1132 Pfam NB-ARC domain 164 400 IPR002182 GO:0043531
Mtr6g1323 1132 SUPERFAMILY RNI-like 758 1066 - -
Mtr6g1323 1132 PRINTS Disease resistance protein signature 182 197 - -
Mtr6g1323 1132 PRINTS Disease resistance protein signature 255 269 - -
Mtr6g1323 1132 PRINTS Disease resistance protein signature 353 367 - -
Mtr6g1323 1132 PRINTS Disease resistance protein signature 960 976 - -
Mtr6g1323 1132 CDD RX-CC_like 2 122 IPR038005 -
Mtr6g1323 1132 Gene3D - 401 490 IPR036388 -
Mtr6g1323 1132 Gene3D Ribonuclease Inhibitor 978 1076 IPR032675 -
Mtr6g1323 1132 Gene3D Ribonuclease Inhibitor 852 977 IPR032675 -
Mtr6g1323 1132 SUPERFAMILY L domain-like 478 863 - -
Mtr6g1323 1132 Gene3D - 139 310 IPR027417 -
Mtr6g1323 1132 Gene3D Ribonuclease Inhibitor 498 840 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1323 Mtr-Chr6 19963834 19967967 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1323 179 658 WRKY Transcription Factor Family AT5G45050 23.048 1.58e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1323 - - mtr:MTR_6g052455 1784.23