Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1313 ATGTCATATGAACAAAGAGATGAAGAGATGGGGAAGTGTAGAGATGCACATCAGCAAAGAGATGAAGATGCTAACGTAGGGGTACGGAATCAAGTTGACACACTATCACATCACTTGAGTTTGACAAGAAAATCATCAGAAATGTTTGTTGTGGAGAATCTTCTTCAGTTTCCAGATTCTGTTACAAGCAGTATTAGAGCAAAGAGAGGCTTTGCAAGACATCCTAGAAGCCTTGCCAAGAGGGTGAGAAGAACTCGGATAAATGAACGAATGAGAAAATTGCAAGAGGTCGTTTTAAACATTGATAAGAATACGTCGGCTGATGAGAACGGTGAATGTGCTGCGGCTAGTGTGCATCCACAACCTATTGCTGACCCAATATGGAGGGGATGTTTGAAGGTTTCAAACATTGGAAAAGTCATTGAACTAATGGGACATTTGTCTACTTTAGCATGCCCTAAAGTTCATGAAGAGGCTAGATATCTCCCTAATATGATTTCTGCAAACTTCCTTCAAAAATCAACCGTGTGGCCTGAAAGTTTCAAGAATTCTGGTACGAATAACTTCAGCATTGGAATTTATTTCCTTTCTCCTCATAATCCAAGTGTTGATGGATCATTTGACGAGCTGGTGGAAGAAATGATTAGTGATAAACTTGCCATAAAGGTTGGGGTTGTAAATGCTGATCTTTTAATTTTTCCTTCTACAGATCTCCCAAGTGAATATAGAACATTTCAATCAAGGTATTATTTATGGGGAGTTTTTAGAAGAAAGCAAACTTCAATCAAGAATAATTATATTGATTACAAAATAGAGAAGAGGAAATTGTACTTTCCACGATAG 843 0.3784 MSYEQRDEEMGKCRDAHQQRDEDANVGVRNQVDTLSHHLSLTRKSSEMFVVENLLQFPDSVTSSIRAKRGFARHPRSLAKRVRRTRINERMRKLQEVVLNIDKNTSADENGECAAASVHPQPIADPIWRGCLKVSNIGKVIELMGHLSTLACPKVHEEARYLPNMISANFLQKSTVWPESFKNSGTNNFSIGIYFLSPHNPSVDGSFDELVEEMISDKLAIKVGVVNADLLIFPSTDLPSEYRTFQSRYYLWGVFRRKQTSIKNNYIDYKIEKRKLYFPR* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1313 280 MobiDBLite consensus disorder prediction 1 23 - -
Mtr6g1313 280 PANTHER - 69 273 - -
Mtr6g1313 280 PANTHER OS12G0161900 PROTEIN 69 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1313 Mtr-Chr6 19727368 19734690 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1313 30 109 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 59.036 1.89e-22 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1313 - - mtr:MTR_6g052260 358.221