Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1304 ATGGATAATCCAAATGCTTTTGTGGATAGTGGTAGTATTCATGATGAAGGCATAGAAGTTGACAACTTTAATGTTGAAAATGAAGATGCATGGTGGGAGCCTAAAACAGATATGTGTTTTTCTAGCATAGATGATGTTAAATCATTTTATAGAGAATATGCTTTGAGAAAGGGTTTTGATTGGAAGATTAGAACATCGAGAAAAGGAAAGGATGGGGAGGTATGCTACTTAATTCTTGCATGCACAAGAGATCGGGCTGAAGTGACGAAAAGTGTATGTACATTGAAGACACGTCCGACAATGGGAAAAAGTTGTCCTGCTAAGATTTGTATCAAGTTGAAAGCAGATGGATTGTGGTACATTAACAAATTTGAGCCTAATCATTCTCATCATACTAGCCCTACAAAGGCAAGGCTGTTCAAGGCTAACAAGAATATGGACTTGCATGTAAAGAGGACAATTCAAATCAATGATGATGCAGGTGTGAGGATCAACAAGACTTTTCAATCTCTTGTTAAAGATGCAGGCGGGCATGAAAATGTACCATTTAATGAAAGAGATGTGAGGAATTATGTTAACAAGGAACGACGTGCAATTGGAAAAGAAGGTGATGGCAAGGCCTTGATAAACTATTTTTGTCAAATGAGGGAACAAAATCCAAATTTCTTCTATGAAATAGATTTGGATGACGATTTTCATGTAAGGAATGTCTTTTGGGCTGATGCAAGAAGTAGGGCTGCTTATGAGTATTTTGGAGATGTTGTAACTTTCGACACAACATATTTGACTAACAAATATGATATGCCTTTTGCTGTTTTTGTTGGTGTGAATCACCATGGTCAATCAACATTACTTGGATGTGGGTTGCTATCAGGAGAAGACACAGAGTCGTTTGTATGGCTTTTTAATTCATGGCTTCGTTGTATGCTAGGAAAGCCCCCTGTTGCTATTGTGAGTGACCAATGTAAGGCAATGCAAAATGCAATCGAGGAAGTGTTCCCTACAACTCGCCATAGGTGGTGTTTATGGCATATAATGAAAAAAATTGCCGAAAAACTCAGTGGGTATGGTGATTATAAAAGGATTAAGTTTGCAATGAAAGAAGTTGTTTATGATACGTTCACAATAGATGATTTTGAAGAGAAATGGTGTTCCTTCATCGAAAAATTTGAGCTTCAACAAAATCATTGGTTGAGTGGATTGTATAAAGAACGTCATAGATGGGTACCAACCTTGTTAAGAAAATATTTTTGGGCCGGTATGTCAACAACTCAACGAAGTGAGAGTATACACGCTTTCTTTGATGGTTATATCAATTCAACGACAAGTCTAAATCAATTTATGAAACAATATGATAATGCTCTCCGAAGTCGAGCAGAAAAAGAATTTGAAGCAGATTTTAATTCGATGAATACCACAATTTCTTGCGGGTCAAACTCGTCAATTGAAAAGCAATTCCAAGGTGAGTATACTCATGCTAAATTTAAGGAGGTTCAAGCTGAATTTAGATCTAAAATGAATTGTGCTTATTCATTGAACACCGTGGAGGGTTGTTTTGCCACATATCATGTGTTGGAGGATGTGTTAGTTGGGGATAGAACAAAAGAACATGTATTTAAAGTTGTGTTTAATCGAGAAAACCATGATCTCAATTGTGAATGCTCATTGTTTGAATTTAGAGGTATTTTGTGTCGACATGTGTTATGTGTGTGTGCTCAAGAGAGGGTTAAAAATGTACCAGAGAAGTATGTTGTAGCTAGATGGAATAAAAATATTAAAAGGAAGCATACATATATCAAGAGCAGTTATTGTGTGACACAATTGAAGCCACAAATGGACAGGTTTGACAAGTTATGCAAGCATTTCTACGAGGTTGCTGAAGTAGCGGCAGAGTTTGAAGACACATCTAAGGACCTCCATGAAATTTTACATCATTTTACTTCTGATTTACCCACCAGGAATGCTACAACTGAAAATGTTAAATGA 1986 0.3661 MDNPNAFVDSGSIHDEGIEVDNFNVENEDAWWEPKTDMCFSSIDDVKSFYREYALRKGFDWKIRTSRKGKDGEVCYLILACTRDRAEVTKSVCTLKTRPTMGKSCPAKICIKLKADGLWYINKFEPNHSHHTSPTKARLFKANKNMDLHVKRTIQINDDAGVRINKTFQSLVKDAGGHENVPFNERDVRNYVNKERRAIGKEGDGKALINYFCQMREQNPNFFYEIDLDDDFHVRNVFWADARSRAAYEYFGDVVTFDTTYLTNKYDMPFAVFVGVNHHGQSTLLGCGLLSGEDTESFVWLFNSWLRCMLGKPPVAIVSDQCKAMQNAIEEVFPTTRHRWCLWHIMKKIAEKLSGYGDYKRIKFAMKEVVYDTFTIDDFEEKWCSFIEKFELQQNHWLSGLYKERHRWVPTLLRKYFWAGMSTTQRSESIHAFFDGYINSTTSLNQFMKQYDNALRSRAEKEFEADFNSMNTTISCGSNSSIEKQFQGEYTHAKFKEVQAEFRSKMNCAYSLNTVEGCFATYHVLEDVLVGDRTKEHVFKVVFNRENHDLNCECSLFEFRGILCRHVLCVCAQERVKNVPEKYVVARWNKNIKRKHTYIKSSYCVTQLKPQMDRFDKLCKHFYEVAEVAAEFEDTSKDLHEILHHFTSDLPTRNATTENVK* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1304 661 Pfam FAR1 DNA-binding domain 48 132 IPR004330 -
Mtr6g1304 661 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 628 IPR031052 GO:0006355
Mtr6g1304 661 Pfam MULE transposase domain 254 348 IPR018289 -
Mtr6g1304 661 ProSiteProfiles Zinc finger SWIM-type profile. 539 575 IPR007527 GO:0008270
Mtr6g1304 661 PANTHER OS03G0843700 PROTEIN 19 628 - -
Mtr6g1304 661 SMART 26again6 550 577 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1304 Mtr-Chr6 19574335 19576320 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr6g1304 MULE 5.3e-34 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1304 - - gmx:102667848 790.415