Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1281 ATGAAGTTTAGTTGTAATGGGTGTCGTGTGCTTCGCAAAGGTTGCAGTGATGATTGTATCATCAAGCCCTGCCTTGAGTGGATCAGTTGTCCTGAATCCCAAGGGAATGCCACCCTCTTCCTTGCCAAATTTTATGGCCGAACCGGTTTGCTCAATCTCCTCACCAATGCTACCAATCAAAATCAAAATCCCCCAGCTGTGTTTAAATCATTGTTGTATGAGGCATCTGGTAGATTGGTGAATCCCACATATGGGGCGCTTGGCTTACTCTGGACTGGGAATTGGAGTCGTTGTGAAGCTGCAGTTGAAGCTGTGCTGACTGGATCGAATATTAATGACAATTTTTCAACTATTGATGGGAAGACATCTTCAGGTACACTCAATGCTGAAAATCATGTTCTTCCAAAAACATATGATATACGCCACGTGGCAAAAGATACCAATGTGGACATCAAAGGGAAAACTCAATTCAAAAGAGTTGGGCAAGTTCTGAAGCCCAAGCCACGAGTTGGTTCAATCGACTCGGCTACAATGTTGAAATCTCTTTTGAAGAATACCAACATGGAAATTGGGGAGACTTCATCAAGGGTTCAAACAGAGAAAATTAATGAAGCTGCTGAGAATCAAGTGAATTTGGAACTCACTCTTGGATTTGATAGCCAATCAACTAAGGGCAAGAAAATATTAGATAAATGA 696 0.4181 MKFSCNGCRVLRKGCSDDCIIKPCLEWISCPESQGNATLFLAKFYGRTGLLNLLTNATNQNQNPPAVFKSLLYEASGRLVNPTYGALGLLWTGNWSRCEAAVEAVLTGSNINDNFSTIDGKTSSGTLNAENHVLPKTYDIRHVAKDTNVDIKGKTQFKRVGQVLKPKPRVGSIDSATMLKSLLKNTNMEIGETSSRVQTEKINEAAENQVNLELTLGFDSQSTKGKKILDK* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1281 231 PANTHER LOB DOMAIN PROTEIN 1 229 - -
Mtr6g1281 231 ProSiteProfiles LOB domain profile. 3 111 IPR004883 -
Mtr6g1281 231 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 229 - -
Mtr6g1281 231 Pfam Lateral organ boundaries (LOB) domain 4 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1281 Mtr-Chr6 18988664 18989685 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1281 1 225 AS2 family AT3G02550 42.979 3.86e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr6g1281 LOB 1.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1281 - - mtr:MTR_1g110840 405.601