Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1255 ATGGCGGCAGGACTAACCGCCACTATAACAATTCAACCCTTAAACCGTTACTACAAACCTTTGTTACCTTATAATCTCCAAAAACCAACACCAACACTTATCTTATCCCCTTTAAGATGTTTTCATCAAAAAACAACCTTAAAAACACAAAGGTTGAAAAGCTTTACCCTTTGTGTTCTCATGGAAGATCCAAAACGTGATACACAAATGGAAATTGAAGAAGAAAAATCAACAACTCTTCAAGAGAATAATTATATTATTCCTCAAGTTGTGTCACTAAAAATGGCAGAGAAATTAGCTAGGAAAAAATCAGAGAGGTTTACTTATCTTGTTGCAGCTGTTATGTCTAGCCTTGGTATAACATCTATGGCTGTGTTGTCTGTTTATTTAAGATTTTCATGGCAAATGGAGGGAAGTGGAGAAATTCCTTGGTCTGAAATGTTTGGTACATTTGCTCTATCTGTGGGTGCTGCTGTGGGAATGGAGTTTTGGGCTAGATGGGCTCACAAGGCTCTTTGGCATGCTTCCTTGTGGCACATGCATGAGTCCCATCATAGAGCAAGAGAAGGAGCTTTCGAGTTGAATGATGTTTTTGCAATAATCAATGCTGTTCCTGCTATCGCTCTCCTTAACTTTGGTTTCTTTCACAAAGGATTGGTCCCTGGTCTTTGCTTTGGTGCGGGTCTTGGAATTACGGTATTTGGGATGGCCTACATGTTTGTACATGATGGTTTGGTTCATAGGAGATTCTCAGTGGGACCCATTGCCAATGTGCCCTATTTCAGAAGGGTAGCTGCAGCCCACAAACTTCACCATTCAGACAAATTCGAAGGGGTGCCATATGGGCTGTTTTTGGGACCAAAGGAACTTGAGGAAGTGGGAGGGCTAGAAGAGCTAGAGAAAGAGATAAGTAGGAGGACAAAATCATACAATAGTAGTTCATGA 945 0.4085 MAAGLTATITIQPLNRYYKPLLPYNLQKPTPTLILSPLRCFHQKTTLKTQRLKSFTLCVLMEDPKRDTQMEIEEEKSTTLQENNYIIPQVVSLKMAEKLARKKSERFTYLVAAVMSSLGITSMAVLSVYLRFSWQMEGSGEIPWSEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRAREGAFELNDVFAIINAVPAIALLNFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHRRFSVGPIANVPYFRRVAAAHKLHHSDKFEGVPYGLFLGPKELEEVGGLEELEKEISRRTKSYNSSS* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1255 314 PANTHER BETA-CAROTENE HYDROXYLASE 17 310 - -
Mtr6g1255 314 Pfam Fatty acid hydroxylase 157 284 IPR006694 GO:0005506|GO:0008610|GO:0016491
Mtr6g1255 314 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 17 310 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1255 Mtr-Chr6 18096451 18101359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1255 1 227 Chloroplast and Mitochondria Gene Families AT4G25700 57.895 4.57e-88 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1255 K15746 - gmx:100785541 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3710 1 48726518 48728605 Mtr6g1255 6 18096451 18101359 ECH
Mtr6g1255 6 18096451 18101359 Mtr6g1255 6 18096451 18101359 ECH
Mtr6g1255 6 18096451 18101359 Mtr1g3710 1 48726518 48728605 PCT