Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1246 ATGGACACTCATAATCTGATTATACATTTCATTTTTCTCATTTTCATTCCATTTTCATCATCTTCTTTCACTCCTACAGATAACTACCTTCTCAACTGTGGATCAAATAACAATGCTACCATTTTCAATAGGCTTTTCATAGGTGATGATTCTACCAACCTAGGCTCAAATTTTCTCTCTGCAGAGAAATCAATTTCCTTAACCAACCAAAACCCATCTCCAAATTTGGCTACTTTGTATCACACTGCAAGAATTTTCACTAGTAAGGGAAGCTACAGATTCACCTTGAAACAAAATGGTACCTTCTTTGTTCGTTTTCATTTTTCGTGTTTTAAGGCTCAAGGTTTTGATCTAAAAGATGCAAAGTTTAATGTCTTGGTTGGTGAGAAATTGGTTCTGAGTAATTTCAAGCTCAATCTCAAGCCTAGTAATGATACAGTTATAAAAGAGTTCATTTTGAAATTTGAGTCAAATTTGCTTGAAATTGTGTTTAGACCTGTTAGTGATTCTGGTTTTGGTTTTATCAATGGTATTGAAGTGTTTTCTGCTCCTGAAGATTATGTTGTAGATTATGGAGCTAGGTTTGTTGGTCCTTTTGGTGTTAGGGAATACAAGAATCTTTCTAATGTTTTAGAAACTATTCATAGGATTAATGTTGGAGGTGAAAAATTAACTCCTTTTAATGATACCCTTTGGAGAACATGGATTCCTGATAAGGATTTTCTGGTTTTTAAGGATGCAGCTAAGGCTGTAGTGAGCACTCACACACCAGATTATCAGAAAGGGGGCGCGGCTAGAGAGATCGCGCCGGATAGTGTTTATATGACTGCTCAGGAGATGAATAGGGATCATAATTCCATTTTAGCTTCACAATTCAACATAACATGGAATTTTTCAGTGGATTCTATTGGTGTTCGACATCTTGTTCGGTTGCATTTCTGCGATATTGTTAGTCCTTCTCTTAATTTGTTATACTTTGATGTGTATATCAATGGATATTCTGCATATAAGGATGTTGATTTGTCATCCCTTACATTCCATATGCTTGCATCTCCGGTTTATGTGGATTTTGTTGTTGATTCTGATGATTCGGGTGTTATTCAAATAAGTGTTGGCCCTTCTGATCTTAGTAGTTCAATGAGGATGAATGCGATACTTAATGGTGCAGAGATAATGAAGTTGTTGAATGTTACGGATTCACATGTTGCTCCTAGGAAGAAAAAGTTGTTGGTATTGGTTGGTTCAATTGTAGGAGGAATTGTTGTTTTACTTTTAGTTATAGCTGTTTTTCTAGTTTGTTGCAGACGCAGGAAGATGAAACCGAAAATAAGGACGGTGGGAAGTATTGGATGGACGCCTTTACGCATGTTTGGAGGGAGTTCTCTTAGTAGAATGTCGGAAGGGACAGCTTATCCGTCTCCCGGTTCATGTGGATATTTAGGCTTGAAAATATCTTTTTCTGATATACAATTAGCAACTAACAATTTTGATGAAAGTCTTGTTATAGGTTCTGGTGGATTTGGTAAGGTTTACAAAGGAGTATTAAGAGACAATGTAAAAGTTGCGGTCAAGAGAGGCATGCCTGGATCAAGACAAGGACTACCAGAATTCCAAAGAGAAATATCAATTTTATCCAATATTCGACATCGCCATCTTGTTTCGTTAGTTGGATTTTGTGAAGAAAATTCCGAAATGATACTTGTCTATGAGTATGTTGAAAAAGGTCCACTCAAAGATCATCTATATGGTTCAGAAGGACTTCAACCTTTGTCTTGGAAGCAGCGTCTCGAGATATGCATAGGTGCAGCTCGAGGTCTACACTATCTTCACACCGGTTTTACACGAGGAGTCATCCACCGCGACATTAAATCCACCAACATTTTGCTCGACGAAGATCATGTTGCTAAGGTGGCTGATTTCGGTCTTTCAAGATCCGGACCTTGTATTGATGAAACTCATGTGAGTACTAATGTGAAAGGTAGTTTTGGTTATCTTGATCCAGAGTATTTTCGAATGCAACAACTAACGGATAAATCGGATGTTTATTCATTTGGAGTTGTACTTTTCGAGGTTCTTTGTGTTAGACCTGCTGTCGATCCACAACTTGATAGGGAACAGGTGAATTTAGCAGAATGGGCTCTTAAATGGCAGAAGAAGGGTATGTTGGAGAATATTATTGATCCTTATCTTGTTGGAAAGATCAAAGACAGGTCATTGAAGAAATTTGGCGAAACAGCAGAGAAATGTTTGGCCGAATACGGAGTTGATAGGCCGTCAATGGGTGATGTATTGTGGAATTTGGAATATTCACTTCAGCTTCAAGAAAGTGGTCAAGAAGTGAATGCCATTACTAATGCAGAAGTGAATGTAACATCTACAACATAA 2385 0.3753 MDTHNLIIHFIFLIFIPFSSSSFTPTDNYLLNCGSNNNATIFNRLFIGDDSTNLGSNFLSAEKSISLTNQNPSPNLATLYHTARIFTSKGSYRFTLKQNGTFFVRFHFSCFKAQGFDLKDAKFNVLVGEKLVLSNFKLNLKPSNDTVIKEFILKFESNLLEIVFRPVSDSGFGFINGIEVFSAPEDYVVDYGARFVGPFGVREYKNLSNVLETIHRINVGGEKLTPFNDTLWRTWIPDKDFLVFKDAAKAVVSTHTPDYQKGGAAREIAPDSVYMTAQEMNRDHNSILASQFNITWNFSVDSIGVRHLVRLHFCDIVSPSLNLLYFDVYINGYSAYKDVDLSSLTFHMLASPVYVDFVVDSDDSGVIQISVGPSDLSSSMRMNAILNGAEIMKLLNVTDSHVAPRKKKLLVLVGSIVGGIVVLLLVIAVFLVCCRRRKMKPKIRTVGSIGWTPLRMFGGSSLSRMSEGTAYPSPGSCGYLGLKISFSDIQLATNNFDESLVIGSGGFGKVYKGVLRDNVKVAVKRGMPGSRQGLPEFQREISILSNIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKDHLYGSEGLQPLSWKQRLEICIGAARGLHYLHTGFTRGVIHRDIKSTNILLDEDHVAKVADFGLSRSGPCIDETHVSTNVKGSFGYLDPEYFRMQQLTDKSDVYSFGVVLFEVLCVRPAVDPQLDREQVNLAEWALKWQKKGMLENIIDPYLVGKIKDRSLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYSLQLQESGQEVNAITNAEVNVTSTT* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1246 794 PANTHER OS07G0166700 PROTEIN 16 784 IPR045272 GO:0004714|GO:0006468
Mtr6g1246 794 Pfam Protein tyrosine and serine/threonine kinase 501 698 IPR001245 GO:0004672|GO:0006468
Mtr6g1246 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Mtr6g1246 794 CDD STKc_IRAK 502 768 - -
Mtr6g1246 794 Gene3D - 210 395 - -
Mtr6g1246 794 Gene3D - 28 185 - -
Mtr6g1246 794 SUPERFAMILY Protein kinase-like (PK-like) 478 768 IPR011009 -
Mtr6g1246 794 Pfam Malectin-like domain 31 393 IPR024788 -
Mtr6g1246 794 ProSiteProfiles Protein kinase domain profile. 496 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1246 794 SMART serkin_6 496 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1246 794 Gene3D Phosphorylase Kinase; domain 1 475 571 - -
Mtr6g1246 794 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 16 784 - -
Mtr6g1246 794 Gene3D Transferase(Phosphotransferase) domain 1 572 791 - -
Mtr6g1246 794 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1246 Mtr-Chr6 17943433 17946328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1246 23 776 Receptor kinase-like Gene Family AT3G46290 51.380 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mtr6g1246 Malectin_like 2.4e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1246 - - gmx:100814974 1185.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1246 6 17943433 17946328 Mtr6g1246 6 17943433 17946328 ECH
Mtr6g1246 6 17943433 17946328 Mtr1g3713 1 48737054 48740295 PCT