Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1231 ATGGCTGAAGCTTTACTTGGAATCGTGATTGAAAACCTCGGATCTTTTGTTCGAGAGGAGATTGCATCCTTTTTGGGTGTTGGAGAATTGACCCAGAAGCTAAATGAAAACCTCACCACAATCCGTGCTGTACTAAAAGATGCTGAAAAGAAGCAGATAACAAGCGATGTTGTGAAACAATGGCTGCAGAAATTGGGTGATGCTGCTTATGTACTTGATGATATATTGGATGAATGTTCAATAACTTCAAAAGCACATGAAGGCAACAAGTGCATCACCCGTTTCCATCCAATGAAGATTTTGGCTCATCGCAACATTGGAAAGAGGATGAAGGAGGTTGCTAAAAGGATTGACGATATTGCTAAAGAAAGGATCGAGTATGGATTTCAACCGGTGGGAGTCACGGAGGAGCACCAACGAGGAGATGATGAACAGATCCAAACTATTTCTGCTATCACCGAACCGAAAGTATATGGAAGAGACAAAGATAAAGAGCAGATTGTAGAGTTTCTTCTAAATGCTAGTGACAGTGAAGAACTCTCTGTCTATTCCATTGTTGGTGTTGGCGGACAAGGAAAAACAACACTCGCTCAAGTGGTCTACAATGATGAAAGGGTAAAAACACATTTTGACTTGAAAATATGGGTGTGTGTTTCGGATGATTTCAGTTTGATGAAAATTTTAGAGTCCATCATAGAAAACACCATTGGAAAAAATCTAGATCTCTTGTCTTTAGAGTCAAGGCAAAAAAAGGTTCAAGAAATTTTGCAAAGCAAAAGGTATTTGCTTGTTCTTGATGATGTGTGGAGTGATGACCAAGTGAAATGGAATAGCTTCAAGTCTTTGTTACCAAATGGAAAGAAAGGTGCATCAATTTTAGTCACTACCAGACTTGACATTGTTGCATCCATCATGGGAACTCATGATGCTCATCCTTTATCACGGTTATCTGATGATGACATCTGGTCTTTGTTCAAACAACATGCTTTTGGAGCAAAGAGAGAAGGGCGTGCAGAGCTTGTGGAAATAGGCCAAAAGTTAGTGAGAAAATGTGTGGGTTCACCTCTTGCTGCTAAAGTATTGGGAAGCCTTTTGCGCTTTAAAAGCGATGAACATCAATGGATTTCTGTGGTGGAAAGTGAGTTTTGGAATTTAGACGATGAGAACCCTGTCATGTCTGCTTTGAGACTAAGCTACTATAACTTGAAATTGTCATTGAGGCCATGTTTTACTTTCTGTGTTGTTTTTCCTAAGGATTTTGTAATGGTGAAGGAAAGGCTCATTCATCTTTGGATGGCTAATGGATTTGTTACATCTAGAGGTAATTTACAGATGGAGCATGTTGGTAATGAGATATGGGATGAATTATACCAAAGGTCATTTTTTCAAGAAGTCAAATCAGATTTAGCAGGTAACATTACATTTAAAATGCATGATTTAGTCCATGATTTAGCTAAGTCTGTTATTGGAGAAGAATGTGTGGCTTCTGAGCCTAAAAGCTTAACTAATCTGTCAACTAGAGCTCACCATATAGGTTGCTTTGATACCAAGAGAAAATTTGATTACAACATGATTCCTTTCAAAAAAGTTGAATCCTTGCGAACCTTTCTTGAACTTAAACCAACCTACAAAAGTTCAGATGTGTTGCTATCGATCATTTCTCTCCGAGCTTTACGTTCAGGTTCTTATCAACTCTCGTCATTGAAGAATTTAATACATTTGAGGTACTTGGAACTTTACAGAAGTGGCATCACAACCTTGCCTGCGTCTGTTTGTAAACTGCATAAACTGCAAACACTTAAACTTGAATATTGCTCTTATTTCTCTAGTTTTCCCGAACAATTCAACAAATTGCAGGACCTTCGACATCTCATGATTAAAGATTGTCAATCATTGAAATCAAGTCCTTTTAGAATTGGGGAGTTAACTAGTCTGAAAACATTGACCAATTTCATAGTTGATTCAAAAACTGGTTATGGTTTAGCAGAGCTACAAAACTTACAATTAGGAGGCAAGCTACACATCAAAGGCCTTCAGAATGTGTCGAAAGAAGAGGATGCTAAAAAAGCTAATTTGAATGGCAAGAAGGACTTAAATAGCTTATATTTGTCATGGGGTGATGAAGCTAATTCAAAAGTTGGCGGTGTTGATGCTGAGCGAGTACTGGAAGCTCTTGAGTCCCATTCAGGACTTAAGCATTTTGGGGTGAATGGTTATGGTGGAACAAATTTTCCTCATTGGATGAAAATTACTTCTTTTCTGAATGGTCTAGTTAGTATTATTCTTTATGACTGTAAAAATTGCAGGCAGCTTCCTCCATTTGGTAAATTACCATGCTTAACTGCTCTTTCTCTATCTGGATTGAACGATATAAAGTACATTGATGATGATTTGTATGAATCTGCGACTGACAAGGCGTTTACATCATTGAAGAAATTGACTTTGTGCAACTTACCAAATTTAGAGAGGGTGTTAAAAGTCAAAGGAGTAGAGATGCTAACACAACTTTTAAAGTTAAATATAAGAAATGTCCCCAAACTTACATTGCCACCCATTCCATCTGTCGAGTCACTTTTTGTTCAAGGAGGAAATGAAGAGTTAATGAAGTCCATTATTTACAACAATTGCAGTGAAGAAGTAGCTTCTTCCTCTTCGAGGGGAATTGCGGGTAATTATATGTATAATCTTAAGTCACTTTTCATATTGAATATCCGCAAACTCAAGGAGTTACCTGTTGAACTCGGTACTCTTGGTGCTTTAGAATTTCTTAGAATTGTTGGATTTGATGAATTGGAGTCATTTTCGGAGCACTTGTTGCAAGGATTGAGTTCTCTTCGAACTTTGTCCGTTGATTCATGTCCTAGATTTAAATCCATATCCGAGGGTATCAGACACCTAACTTGTCTCGAGACTCTTAAAATCATTAGCTGTCCACAATTCGTTTTTCCACATAACATGAACAGTCTAACTTCCCTTCGTCAACTGGAAGTTTGGGAGGATAATGAAAACATAATAGACGGCTTACAAACATCCTTCTCAAGCATCCCCTCATTGCAAAAGTTGTCTCTGGCCTATTTTCCTTCAGTAACATCCTTGCCAGACTGGTTGGGTGCCATGACTTCTCTTCAGACATTAGAAATTTTTAACTTTCCAAAGTTAAGTTCACTGCCAGACAACTTTCAGCAACTCCGGAACTTGCAAATGATACGTTTTGATGATTGCCCTAAGTTGGAGAAGAGATTGAAGATAGGAAAAGGTGAAGATTGGCATAAAATAGCTCACATTCCTGAATTTAGATTGAATTTCAAATTGCAATTGCAATCTGATGCAAAACCAACAATTTGTGAGAATATTAAATCAGCATGGAATTGGGGGAAGCGATTCTTGCACCGCCCAGCTCAATGGGTAAACCAAGATGAATTTGAAATGATGATTGCAGATATAAATGAGTAA 3453 0.3788 MAEALLGIVIENLGSFVREEIASFLGVGELTQKLNENLTTIRAVLKDAEKKQITSDVVKQWLQKLGDAAYVLDDILDECSITSKAHEGNKCITRFHPMKILAHRNIGKRMKEVAKRIDDIAKERIEYGFQPVGVTEEHQRGDDEQIQTISAITEPKVYGRDKDKEQIVEFLLNASDSEELSVYSIVGVGGQGKTTLAQVVYNDERVKTHFDLKIWVCVSDDFSLMKILESIIENTIGKNLDLLSLESRQKKVQEILQSKRYLLVLDDVWSDDQVKWNSFKSLLPNGKKGASILVTTRLDIVASIMGTHDAHPLSRLSDDDIWSLFKQHAFGAKREGRAELVEIGQKLVRKCVGSPLAAKVLGSLLRFKSDEHQWISVVESEFWNLDDENPVMSALRLSYYNLKLSLRPCFTFCVVFPKDFVMVKERLIHLWMANGFVTSRGNLQMEHVGNEIWDELYQRSFFQEVKSDLAGNITFKMHDLVHDLAKSVIGEECVASEPKSLTNLSTRAHHIGCFDTKRKFDYNMIPFKKVESLRTFLELKPTYKSSDVLLSIISLRALRSGSYQLSSLKNLIHLRYLELYRSGITTLPASVCKLHKLQTLKLEYCSYFSSFPEQFNKLQDLRHLMIKDCQSLKSSPFRIGELTSLKTLTNFIVDSKTGYGLAELQNLQLGGKLHIKGLQNVSKEEDAKKANLNGKKDLNSLYLSWGDEANSKVGGVDAERVLEALESHSGLKHFGVNGYGGTNFPHWMKITSFLNGLVSIILYDCKNCRQLPPFGKLPCLTALSLSGLNDIKYIDDDLYESATDKAFTSLKKLTLCNLPNLERVLKVKGVEMLTQLLKLNIRNVPKLTLPPIPSVESLFVQGGNEELMKSIIYNNCSEEVASSSSRGIAGNYMYNLKSLFILNIRKLKELPVELGTLGALEFLRIVGFDELESFSEHLLQGLSSLRTLSVDSCPRFKSISEGIRHLTCLETLKIISCPQFVFPHNMNSLTSLRQLEVWEDNENIIDGLQTSFSSIPSLQKLSLAYFPSVTSLPDWLGAMTSLQTLEIFNFPKLSSLPDNFQQLRNLQMIRFDDCPKLEKRLKIGKGEDWHKIAHIPEFRLNFKLQLQSDAKPTICENIKSAWNWGKRFLHRPAQWVNQDEFEMMIADINE* 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1231 1150 PRINTS Disease resistance protein signature 182 197 - -
Mtr6g1231 1150 PRINTS Disease resistance protein signature 255 269 - -
Mtr6g1231 1150 PRINTS Disease resistance protein signature 351 365 - -
Mtr6g1231 1150 PRINTS Disease resistance protein signature 616 632 - -
Mtr6g1231 1150 SUPERFAMILY L domain-like 476 853 - -
Mtr6g1231 1150 Gene3D Ribonuclease Inhibitor 981 1085 IPR032675 -
Mtr6g1231 1150 Gene3D Ribonuclease Inhibitor 663 859 IPR032675 -
Mtr6g1231 1150 Gene3D Ribonuclease Inhibitor 865 980 IPR032675 -
Mtr6g1231 1150 Gene3D Ribonuclease Inhibitor 491 662 IPR032675 -
Mtr6g1231 1150 PANTHER OS05G0414200 PROTEIN 29 853 - -
Mtr6g1231 1150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 413 IPR027417 -
Mtr6g1231 1150 PANTHER DISEASE RESISTANCE PROTEIN RP 29 853 IPR044974 GO:0006952
Mtr6g1231 1150 Gene3D - 6 124 - -
Mtr6g1231 1150 SUPERFAMILY RNI-like 891 1079 - -
Mtr6g1231 1150 Pfam Rx N-terminal domain 6 87 IPR041118 -
Mtr6g1231 1150 Coils Coil 31 51 - -
Mtr6g1231 1150 Pfam NB-ARC domain 161 399 IPR002182 GO:0043531
Mtr6g1231 1150 CDD RX-CC_like 2 122 IPR038005 -
Mtr6g1231 1150 Gene3D - 315 403 IPR042197 -
Mtr6g1231 1150 Gene3D - 139 310 IPR027417 -
Mtr6g1231 1150 Gene3D - 405 487 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1231 Mtr-Chr6 17662883 17666920 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1231 179 794 WRKY Transcription Factor Family AT5G45050 23.661 1.09e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1231 - - mtr:MTR_0256s0050 1489.55