Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1208 ATGGCCGACGCTTTACTTGCAATCGTGATTGAAAATCTCGGACATTTTGTTCGAGATGAGCTTGCATCCTTTTTGGGTGTTGGAGAATTGACCGAGAAGCTGCGTGGAAAACTCAGATTAATCCGTGCTGTCCTAAAAGATGCTGAAAAAAAGCAAATAACAAACGATGCCGTGAAAGAGTGGCTACAGCAACTCGGTGATTCTGCTTATGTACTTGATGATATATTGGATGAATGTTCAATAACCTTAAAACCACACGGAGACGACAAGTGCATCACTAGTTTCCATCCTGTGAAGATTTTGGCTTGTCGCAACATTGGAAAGAGGATGAAGGAGGTTGCTAAAAGGATTGATGATATTGCTGAAGAAAGGAACAAATTTGGATTTCAACGAGTGGGAGTCACGGAGGAGCATCAACGAGGAGATGATGAATGGCGCCAAACTATTTCTACTGTCACCGAACCGAAAGTATATGGAAGAGACAAAGATAAAGAACAGATTGTAGAGTTTCTTCTAAATGCCAGCGAAAGTGAAGAACTCTTTGTCTGTTCCATTGTTGGTGTTGGCGGACAAGGAAAAACAACACTCGCTCAAATGGTCTACAATGATGAAAGGGTAAAAACACATTTTGACTTGAAAATATGGGTGTGTGTTTCGGATGATTTCAGTTTGATGAAAATTTTAGAGTCCATCATAGAAAACACCATTGGAAAAAACCTAGATCTCTTGTCTTTAGAGTCAAGGAAAAAAAAGGTTCAAGATATTTTGCAAAACAAAAGGTATTTGCTTGTTCTTGATGATGTTTGGAGTGAAGACCAAGAGAAATGGAATAAGTTAAAGTCTTTGTTGCAACTTGGAAAGAAAGGTGCATCAATATTGGTCACTACCAGACTTCAGATTGTTGCATCCATCATGGGAACTAAGGTTCATCCTTTAGCACAGTTATCTGATGATGACATCTGGTCGTTGTTCAAACAACATGCTTTTGGAGCAAATAGAGAAGGGCGTGCAGAGCTTGTGGAAATAGGCCAAAAGTTAGTGAGAAAATGTGTGGGTTCACCTCTTGCTGCTAAAGTATTGGGAAGCCTTTTGCGCTTTAAAAGCGATGAACATCAATGGATTTCTGTGGTGGAAAGTGAGTTTTGGAATTTAGCTGATGATAACCAAGTCATGTCTGCTTTGAGACTGAGCTACTTTAACTTGAAATTGTCATTGAGGCCATGTTTTACTTTTTGTGCTGTTTTTCCTAAGGATTTTAAAATGGTGAAGGAAAATCTCATTCAACTTTGGATGGCTAATGGACTTGTTGCATCTAGAGGAAACTTACAGATGGAGCATGTTGGTAATGAGGTATGGAATGAATTATATCAAAGGTCATTTTTTCAAGAAGTCGAATCAGATTTAGCAGGTAACATTACATTCAAAATGCATGATTTAGTCCATGATTTAGCTCAGTCTATTATGGGAGAAGAATGTGTCTCTTGTGATGTTTCAAAGTTGACTAATTTGCCAATTAGAGTTCACCATATCAGGCTGTTTGATAACAAATCAAAAGATGACTACATGATTCCCTTCCAAAATGTTGATTCCTTGCGAACTTTCCTTGAGTATACGCGACCTTGCAAGAATTTAGATGCGTTGCTATCAAGCACTCCTCTCCGAGCTTTACGTACCAGTTCTTATCAACTCTCGTCATTGAAGAATTTAATACATTTGAGGTACTTGGAACTTTACAGAAGTGATATCACAACCTTGCCTGCGTCTGTTTGTAAACTACAAAAATTGCAAACACTTAAACTTCGAGGTTGTTGTTTTTTATCTAGTTTTCCCAAAACATTCACAAAATTGCAGGACCTTCGACATCTCATTATTGAAGATTGTCCATCATTGAAATCAACTCCTTTTAAAATTGGGGAGTTAACTAGTCTCCAAACATTGACCAATTTCATAGTTGATTCAAAAATTGGTTTTCGTTTAGCAGAGCTACACAACTTACAATTAGGAGGCAAGTTATACATCAAAGGCCTTGAGAATGTGTCAAATGAGGAGGATGCTAGAAAAGCTAATTTGATTGGCAAGAAAGACTTAAATCGCTTATATTTGTCATGGGATGATTCACAAGTTAGTGGTGTTCATGCTGAGCGAGTATTTGATGCTCTTGAGCCCCATTCAGGACTTAAGCATGTTGGGGTGGATGGTTATATGGGAACACAATTTCCTCGTTGGATGAGAAATACTTCTATTCTAAAAGGTTTAGTTAGTATTATTCTCTATGACTGTAAAAACTGCAGGCAGCTTCCTCCATTTGGTAAATTACCATGTTTAGATATTCTTTTTGTATCTGGAATGAGAGATATAAAGTACATTGATGATGATTTGTATGAACCTGCGACTGAGAAGGCTCTTACGTCATTGAAAAAGTTGACTTTGGAAGGCTTACCAAATTTAGAGAGGGTGTTGGAAGTCGAAGGAATAGAGATGCTACCACAACTTTTAAATTTAGATATAACAAATGTCCCCAAACTTACATTGCCACCCCTTCCATCTGTTAAATCACTTTCTGCTAAAGGAGGAAATTAA 2580 0.3783 MADALLAIVIENLGHFVRDELASFLGVGELTEKLRGKLRLIRAVLKDAEKKQITNDAVKEWLQQLGDSAYVLDDILDECSITLKPHGDDKCITSFHPVKILACRNIGKRMKEVAKRIDDIAEERNKFGFQRVGVTEEHQRGDDEWRQTISTVTEPKVYGRDKDKEQIVEFLLNASESEELFVCSIVGVGGQGKTTLAQMVYNDERVKTHFDLKIWVCVSDDFSLMKILESIIENTIGKNLDLLSLESRKKKVQDILQNKRYLLVLDDVWSEDQEKWNKLKSLLQLGKKGASILVTTRLQIVASIMGTKVHPLAQLSDDDIWSLFKQHAFGANREGRAELVEIGQKLVRKCVGSPLAAKVLGSLLRFKSDEHQWISVVESEFWNLADDNQVMSALRLSYFNLKLSLRPCFTFCAVFPKDFKMVKENLIQLWMANGLVASRGNLQMEHVGNEVWNELYQRSFFQEVESDLAGNITFKMHDLVHDLAQSIMGEECVSCDVSKLTNLPIRVHHIRLFDNKSKDDYMIPFQNVDSLRTFLEYTRPCKNLDALLSSTPLRALRTSSYQLSSLKNLIHLRYLELYRSDITTLPASVCKLQKLQTLKLRGCCFLSSFPKTFTKLQDLRHLIIEDCPSLKSTPFKIGELTSLQTLTNFIVDSKIGFRLAELHNLQLGGKLYIKGLENVSNEEDARKANLIGKKDLNRLYLSWDDSQVSGVHAERVFDALEPHSGLKHVGVDGYMGTQFPRWMRNTSILKGLVSIILYDCKNCRQLPPFGKLPCLDILFVSGMRDIKYIDDDLYEPATEKALTSLKKLTLEGLPNLERVLEVEGIEMLPQLLNLDITNVPKLTLPPLPSVKSLSAKGGN* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1208 859 Pfam NB-ARC domain 161 398 IPR002182 GO:0043531
Mtr6g1208 859 Pfam Rx N-terminal domain 6 84 IPR041118 -
Mtr6g1208 859 PANTHER OS05G0414200 PROTEIN 29 847 - -
Mtr6g1208 859 PANTHER DISEASE RESISTANCE PROTEIN RP 29 847 IPR044974 GO:0006952
Mtr6g1208 859 Gene3D Ribonuclease Inhibitor 516 858 IPR032675 -
Mtr6g1208 859 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 412 IPR027417 -
Mtr6g1208 859 PRINTS Disease resistance protein signature 182 197 - -
Mtr6g1208 859 PRINTS Disease resistance protein signature 255 269 - -
Mtr6g1208 859 PRINTS Disease resistance protein signature 350 364 - -
Mtr6g1208 859 PRINTS Disease resistance protein signature 590 606 - -
Mtr6g1208 859 Gene3D - 6 121 - -
Mtr6g1208 859 CDD RX-CC_like 2 122 IPR038005 -
Mtr6g1208 859 Gene3D - 314 402 IPR042197 -
Mtr6g1208 859 Gene3D - 143 312 IPR027417 -
Mtr6g1208 859 SUPERFAMILY L domain-like 475 847 - -
Mtr6g1208 859 Gene3D - 404 486 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1208 Mtr-Chr6 17009695 17012713 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1208 185 685 WRKY Transcription Factor Family AT5G45050 24.357 6.08e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1208 - - mtr:MTR_0144s0060 1688.7