Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1201 ATGTCAAGTGAAGTAGTCAAGAAAGAAGACTCTCTAAATGTGAAAATCACTAGCAAAAGCTATGTGAAACCTGAGGAAAAAATTGGGAAAAAAGAGTATCAATTGGTCACATTTGACCTACCTTACTTAGCTTTTTACTACAACCAAAAATTAATTTTTTACAAAGGAGGTAACTTTGAAGAAAATGTTGAGAAACTCAAAAATGGGCTTAGTGTAGTTTTGAAGGAGTTTCATCAACTAGCTGGTAAATTAAGTAAAGATGAAGAGGGTGTGTTTTTTGTTGAATATGATGATGACTTGGTTGGTGTTGAAGTTGTTGAAGCTGTTGCTGATGAAATTGGTGTTGAAGATCTAACTGTTGCTGAAAGTAGTGCCATTTTGAAGGAATTGATTCCTTATAGTGGAATCTTGAATTTGGAAGGCATGCATAGACCCTTGTTGGCTGTTCAGCTAACAAAGCTCAAAGATGGGCTCGCAATGGGCTTGGCTTTTAACCATGCTGTCCTTGATGGAACATCCACGTGGCACTTCATGACTTCATGGGCCGAGATATGCAGTGGTGGACCGATCACAACAGCCCAACCATTCTTGGAACGAACTAAGGCTCGAAACACACGCGTGAAGCTTGACCTCTCCCTACCCGAGCCCAAAGGCCCACCACCATCAGCCAATGGTGAGGTAAAGGTTGAACACAAAGGCCCAGCACCATCGGCCAATGGTGAGGCAAAGGTTGAACCTGAAGGCCCACCACCATCGGTCAACGGTGAGAAAAGGCCCATACTGCGAGAAAAAATCTTCAAATTTTCTGAGTCAGCCATCGACAAAATCAAGTCAACAGTCAACCAAACCCTTCCATCGGACGGTTCAAAACCATTCTCAACATTTCAGGCTCTCTCCACTCATATTTGGCGCCACGTGAGCCTTGCACGTGACCTAAAACCCGAAGACTACACAGTGTTCACAGTCTTCGCAGATTGTAGAAAACGAGTGAACCCACCAATGCCAGAGGCATACTTTGGAAACCTAATTCAAGCTATATTCACCGTCACGGCTGCTGGCCTTTTGGCGGCCCACCCTCCACAATTCGGTGCTTCTTTGATCCAAAAGGTTATTGAAGGCCATGATGCTAAAGCTATTGATGAACGTAACAAAGAGTGGGAGAGTGCACCCAAGATTTTTCAATTCAAAGATGCTGGTATCAATTGTGTTGCAGTTGGAAGTTCACCTAGGTTTAAGGTTTATGACATTGATTTTGGGTTTGGGAAGCCAGAGATTGTGAGAAGTGGGACCAATAACAAATTTGATGGAATGATTTATTTGTATCCAGGGAAGAGTGGAGGGAGGAGCATTGATGTTGAATTAACATTAGAGCCTGAGGCTATGGGAAGGTTGGAGCAAGATAAGGAATTTCTTATGGAAGTATAA 1425 0.4295 MSSEVVKKEDSLNVKITSKSYVKPEEKIGKKEYQLVTFDLPYLAFYYNQKLIFYKGGNFEENVEKLKNGLSVVLKEFHQLAGKLSKDEEGVFFVEYDDDLVGVEVVEAVADEIGVEDLTVAESSAILKELIPYSGILNLEGMHRPLLAVQLTKLKDGLAMGLAFNHAVLDGTSTWHFMTSWAEICSGGPITTAQPFLERTKARNTRVKLDLSLPEPKGPPPSANGEVKVEHKGPAPSANGEAKVEPEGPPPSVNGEKRPILREKIFKFSESAIDKIKSTVNQTLPSDGSKPFSTFQALSTHIWRHVSLARDLKPEDYTVFTVFADCRKRVNPPMPEAYFGNLIQAIFTVTAAGLLAAHPPQFGASLIQKVIEGHDAKAIDERNKEWESAPKIFQFKDAGINCVAVGSSPRFKVYDIDFGFGKPEIVRSGTNNKFDGMIYLYPGKSGGRSIDVELTLEPEAMGRLEQDKEFLMEV* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1201 474 Gene3D - 238 467 IPR023213 -
Mtr6g1201 474 Gene3D - 11 211 IPR023213 -
Mtr6g1201 474 MobiDBLite consensus disorder prediction 209 257 - -
Mtr6g1201 474 Pfam Transferase family 13 470 - -
Mtr6g1201 474 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 15 470 - -
Mtr6g1201 474 PANTHER BAHD ACYLTRANSFERASE DCR-RELATED 15 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1201 Mtr-Chr6 16897583 16901852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1201 12 474 Monolignol Biosynthesis Gene Families AT5G48930 25.847 8.20e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1201 K19747 - gmx:100790669 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1201 6 16897583 16901852 Mtr6g1201 6 16897583 16901852 ECH