Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1187 ATGATTTGCAATCAGAGTTCTTCCTTCATAATAGCAATATCATTGCTAATATCTTTGCTTGGTAATGGCCTTCCATCCATTGGATGTCCTTTCAATCTATCTTGTACACATGATAACAAGATTCTTGAACTACCTGCTTATCCAGTCCCAATAAAACTCCTCATAAGGGTCATTAACTACACATCGCAGGTATTGGAAGCACGCGATCCCGAACACTGTTTTCCACGACTCTTACTTCAGCCCAATTTCTCTTCATCAATTTTTCCTTTTCGGATTATTGATGGTTCTAGGTTTCCTGTGCTATACAATGAGTTTACCCATATTAGTTTCTTTGATTGTTCTTCGCTAGGGCAGCGTTATCTTAGAAGGGTCCATTCGCAGCAGGATATGATTTCTTGTCCAATTTATATTGCAGGATTTTACGATGATGTCGTTGAATTGAACCTTGTATCCTGCACCAAATTGTCTCAACGAGTTTCTCCCCTTATTCTTTCGGATGAATCTGTATATGGGATACAACAAAACTCAATCTTATTATCATGGTCGGGAACAACAATTGACAAAGGATGCTTAGAATGTAAGCACAAATCAAAAAAGAAGATTATTTTATCCTCTGCAGGTGTAATCATTGGCTCAACTCTGCTTGTTCTTCTATTTGGTTCCATTTTTCAAATATATAGATATGTTAAAATGAAAGGCGAAGATCATACAAGAATTGAAAACTTTTTGAAGGATTACAGGGCTTTAAAGCCAACTAGGTTCTCTTATGCAGACTTGAAGAGAATTACAAATAAATTTAAAGATAAGATAGGGGAAGGGGCTCATGGAGCTGTTTATAAAGGTAAATTATCGAACCAAATTCTAGTAGCCGTGAAGATTCTTAATAATGCAGAGGGAGATGGGAAGGAATTCATAAATGAAGTGGGAACCATGGGCAAAATCCACCATCTCAATGTCGTTCGTTTGCTCGGCTTTTGCGCAGATGGTTTTCATCGTGCTTTAGTTTATGACTTTTTTCCAAATGGTTCGTTACAAAAATTCATATCTCACCCGAACAACAAAGATGATTTCCTTGGATGGGATAAATTGCAACAAATTGCTCTAGGCATAGCTAATGGCATTGAGTATCTCCACCAAGGTTGTGATCAAAGAATTTTACACTTTGACATCAATCCTCATAATATCTTGCTAGATGACAATTTCACTCCCAAAATCACAGATTTTGGTTTGGCTAAGATGTGTTCGAAAAATCAAAGTAATGTATCCATGACTGCAGCTAAGGGAACATTAGGCTACATGGCACCTGAAGTTTTTTCTAGAAATTTTGGAAATGTCTCTTATAAGTCCGATATATACAGTTACGGTATGTTATTGTTGGAGATGGTTGGAGGAAGAAAGAATACAAAAACAACAAGTGGTGATGAAAACATACAAGTTGAGTATCCAGACTGGATCCACAATTTGTTTGAAGGAGATATACAAATCCCTATTGATGAAGAGGGAGATTTTAGAATTCCAAAAAAATTGGCAACCGTCGGTCTGTGGTGTATCCAATGGCACCCTTTACATCGACCAACAATGAAATCTGTGATAAAAATGCTTCAAGCAGAGGCGGACAAGTTAAAAGTACCAACAAATCCTTTCGGACCAACAACTAAAACTAAGACAAATTCCAATATTGTTGCAGAACGTATAAATTTGGAACTGGAGGTGATTGAAGAAATAGAATAG 1731 0.3692 MICNQSSSFIIAISLLISLLGNGLPSIGCPFNLSCTHDNKILELPAYPVPIKLLIRVINYTSQVLEARDPEHCFPRLLLQPNFSSSIFPFRIIDGSRFPVLYNEFTHISFFDCSSLGQRYLRRVHSQQDMISCPIYIAGFYDDVVELNLVSCTKLSQRVSPLILSDESVYGIQQNSILLSWSGTTIDKGCLECKHKSKKKIILSSAGVIIGSTLLVLLFGSIFQIYRYVKMKGEDHTRIENFLKDYRALKPTRFSYADLKRITNKFKDKIGEGAHGAVYKGKLSNQILVAVKILNNAEGDGKEFINEVGTMGKIHHLNVVRLLGFCADGFHRALVYDFFPNGSLQKFISHPNNKDDFLGWDKLQQIALGIANGIEYLHQGCDQRILHFDINPHNILLDDNFTPKITDFGLAKMCSKNQSNVSMTAAKGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTKTTSGDENIQVEYPDWIHNLFEGDIQIPIDEEGDFRIPKKLATVGLWCIQWHPLHRPTMKSVIKMLQAEADKLKVPTNPFGPTTKTKTNSNIVAERINLELEVIEEIE* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1187 576 ProSiteProfiles Protein kinase domain profile. 264 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1187 576 Pfam Protein kinase domain 267 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1187 576 Gene3D Transferase(Phosphotransferase) domain 1 339 547 - -
Mtr6g1187 576 SUPERFAMILY Protein kinase-like (PK-like) 245 534 IPR011009 -
Mtr6g1187 576 ProSitePatterns Protein kinases ATP-binding region signature. 270 292 IPR017441 GO:0005524
Mtr6g1187 576 PANTHER RUST RESISTANCE KINASE LR10-RELATED 20 576 IPR045874 GO:0004672
Mtr6g1187 576 Gene3D Phosphorylase Kinase; domain 1 239 338 - -
Mtr6g1187 576 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 20 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1187 Mtr-Chr6 16620504 16622697 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1187 207 571 Receptor kinase-like Gene Family AT1G66910 43.583 1.28e-99 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr6g1187 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1187 - - adu:110273083 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g1187 6 16620504 16622697 Mtr6g1187 6 16620504 16622697 ECH