Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g1184 ATGGATAATCATTTTCCTATTTTGCTCATAATTACACATATCTCTTTCTTCTTCTTAATAACCACTTCCCACTCTCAACCTCAACCAGTTCACAATTTTTCAAGTTGTAAACACATCATGAGCTCCTACAACTGTGGAAATATTTCCAACATCTCTTATCCATTTTGGGGACAAAATCGTCCTTTTCAATGTGGGGCTGGCAACCCTTTTTACCTTAACTGCCACAACAACAACACCACCACCATTCTCTTATCCTCACAAAATTTCACAGTACTTGATATAAACAGCAAAGACCACATCATCAAACTCAAAAGAACAGACCTTGATCAAAATCTATGTTCTCCTAAATTTAATGATACTTATTTGTTTCCACCTTTGTTTCAATATCCCCAAAATGTTAAAAACCTTTCCATATACTACAATTGTACTTCCACTATCTCTCAAGATTTAGCAGAAAATTCTGTTTGTGGATCTCACTATCCTTCTTTTGGCTATGTCGGAAATGAAGATAAGTTGTTTGAAGAAGATAAGTTGTTTGAAGAAGATCCGTCTCTGAGATGTCAGAAACATATCAAAGTGCCGGTAGGATCATATTTTCTTCTGGAGGCGGATTATTTTGAGCGTGGTAAACTTGAAAGAGTATTAAATGATGGGTTCGAGGTGACGTATAATGTGAATGAAGAATGTTTAAGCTGCCTTGGAAGTGAAGGAGGAGATTGTTTGAGCGATTCTATTGATAATCATATTGGGTTATGCTATTATGATAATTTAACTGATGCATCTATTGCTTCTTCCACAGATCTTTCTTCTGATGAAAAAAGAAAATTGAAGGATGGGCGTAGTGTTGCTGTAAAGAGGTTACATGAGAACAGTTATAGAAGAGTTCAGCAATTCATGAATGAAGTTGAAATCCTGGCTAGATTAGTCCACCCAAATCTTGTGTCGCTATATGGATGCACGTCAAACCACAGCCGCGAACTTCTGCTTGCCTACGAGTATGTTTCTAATGGAGCTGTAGCTGATCATCTTCATGGTAATCAAGCAAAAGATGGAAAACTCTCTTGGCATATTAGAATGAATATTGCTGTGGAGACGGCAAGTGCATTGAGATATCTTCATATTTCTGACATCATTCACAGAGATATAAAAACCAATAATATTCTTCTTGACACCAATTTTCGTGTCAAAGTAGCAGATTTTGGACTCTCGCGCCTTTTTCCAATTGATCATAGTCACGTTTCAACAGCTCCACTAGGAACTGCGGGTTATGTAGATCCCGAGTACAATCAGTTCTATCAGCTTACTCATAAAAGCGATGTCTACAGCTTCGGAGTAGTGATGATCGAGTTGATATCATCTTTGCCTGCTGTGGATATGACAAGGCATAGGGATGATATCAATCTGTCCACCATGGCTATGAACAAAATTCAAAATCAAGCTTTGCATGAGCTTGTGGATCCTACCCTCGGTTATGACTCAGATTCCAAGGTAAAGGAAATGATAAATGACGTGGCTGAGTTAGCATTTCGGTGTCTACAAAGTTCCAAAGATATGAGACCATGCATGGATGAAGTCTTGAAAACTTTGCAAGATATTCAGGGTGCTGGTGCGAATGAAAGCCAACGTGAAACAGCAAACATTTCAAACTCTCATCACGACGTTGTGTTGTGCAATTATGATCCACGCCCAATATCACCTGATTCAAATGATGTGAGCTATTATACAGCACCAAGTGCTAGTGGATAG 1746 0.3832 MDNHFPILLIITHISFFFLITTSHSQPQPVHNFSSCKHIMSSYNCGNISNISYPFWGQNRPFQCGAGNPFYLNCHNNNTTTILLSSQNFTVLDINSKDHIIKLKRTDLDQNLCSPKFNDTYLFPPLFQYPQNVKNLSIYYNCTSTISQDLAENSVCGSHYPSFGYVGNEDKLFEEDKLFEEDPSLRCQKHIKVPVGSYFLLEADYFERGKLERVLNDGFEVTYNVNEECLSCLGSEGGDCLSDSIDNHIGLCYYDNLTDASIASSTDLSSDEKRKLKDGRSVAVKRLHENSYRRVQQFMNEVEILARLVHPNLVSLYGCTSNHSRELLLAYEYVSNGAVADHLHGNQAKDGKLSWHIRMNIAVETASALRYLHISDIIHRDIKTNNILLDTNFRVKVADFGLSRLFPIDHSHVSTAPLGTAGYVDPEYNQFYQLTHKSDVYSFGVVMIELISSLPAVDMTRHRDDINLSTMAMNKIQNQALHELVDPTLGYDSDSKVKEMINDVAELAFRCLQSSKDMRPCMDEVLKTLQDIQGAGANESQRETANISNSHHDVVLCNYDPRPISPDSNDVSYYTAPSASG* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g1184 581 Gene3D Phosphorylase Kinase; domain 1 273 334 - -
Mtr6g1184 581 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 15 255 - -
Mtr6g1184 581 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 275 569 - -
Mtr6g1184 581 ProSiteProfiles Protein kinase domain profile. 254 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1184 581 Pfam Wall-associated receptor kinase galacturonan-binding 44 104 IPR025287 GO:0030247
Mtr6g1184 581 Pfam Wall-associated receptor kinase C-terminal 175 255 IPR032872 -
Mtr6g1184 581 Gene3D Transferase(Phosphotransferase) domain 1 335 547 - -
Mtr6g1184 581 SMART serkin_6 268 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr6g1184 581 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 275 569 IPR044652 -
Mtr6g1184 581 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 15 255 IPR044652 -
Mtr6g1184 581 SUPERFAMILY Protein kinase-like (PK-like) 276 533 IPR011009 -
Mtr6g1184 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 377 389 IPR008271 GO:0004672|GO:0006468
Mtr6g1184 581 Pfam Protein tyrosine and serine/threonine kinase 275 529 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g1184 Mtr-Chr6 16560817 16564806 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr6g1184 275 542 Receptor kinase-like Gene Family AT1G25390 64.684 1.18e-115 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mtr6g1184 PK_Tyr_Ser-Thr 8.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g1184 - - cam:101492618 484.182